Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc30Q8BVF4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.64■■□□□ 1.06
Ccdc30Q8BVF4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc30Q8BVF4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Mir1668-201ENSMUST00000184114 107 ntBASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc30Q8BVF4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Gm9987-201ENSMUST00000069768 567 ntBASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ccdc30Q8BVF4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc30Q8BVF4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Gm44450-201ENSMUST00000199528 114 ntBASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc30Q8BVF4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc30Q8BVF4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc30Q8BVF4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc30Q8BVF4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ccdc30Q8BVF4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms