Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco4Q9JIS3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco4Q9JIS3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco4Q9JIS3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Gm13238-201ENSMUST00000117655 780 ntBASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco4Q9JIS3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smco4Q9JIS3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms