Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgn5Q9JL35 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgn5Q9JL35 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmgn5Q9JL35 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.27■□□□□ 0.67
Hmgn5Q9JL35 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.26■□□□□ 0.67
Hmgn5Q9JL35 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgn5Q9JL35 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Gm42778-201ENSMUST00000199644 553 ntBASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgn5Q9JL35 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Gm13401-201ENSMUST00000117074 291 ntBASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hmgn5Q9JL35 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms