Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC30.47■■■□□ 2.47
Rtl1Q7M732 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Rtl1Q7M732 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Rtl1Q7M732 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rtl1Q7M732 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Rtl1Q7M732 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rtl1Q7M732 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rtl1Q7M732 Gm26039-201ENSMUST00000158152 144 ntBASIC30.45■■■□□ 2.47
Rtl1Q7M732 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
Rtl1Q7M732 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Rtl1Q7M732 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Rtl1Q7M732 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Rtl1Q7M732 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rtl1Q7M732 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Gm18115-201ENSMUST00000221209 621 ntBASIC30.43■■■□□ 2.46
Rtl1Q7M732 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Rtl1Q7M732 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Gm13186-201ENSMUST00000118031 316 ntBASIC30.42■■■□□ 2.46
Rtl1Q7M732 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rtl1Q7M732 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rtl1Q7M732 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rtl1Q7M732 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC30.41■■■□□ 2.46
Rtl1Q7M732 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rtl1Q7M732 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Rtl1Q7M732 Gm44450-201ENSMUST00000199528 114 ntBASIC30.41■■■□□ 2.46
Rtl1Q7M732 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC30.41■■■□□ 2.46
Rtl1Q7M732 AC124392.1-201ENSMUST00000225172 5324 ntBASIC30.41■■■□□ 2.46
Rtl1Q7M732 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Gm27741-201ENSMUST00000185060 237 ntBASIC30.4■■■□□ 2.46
Rtl1Q7M732 Gm27704-201ENSMUST00000185094 107 ntBASIC30.4■■■□□ 2.46
Rtl1Q7M732 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
Rtl1Q7M732 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC30.4■■■□□ 2.46
Rtl1Q7M732 Phf7-203ENSMUST00000226565 1971 ntBASIC30.4■■■□□ 2.46
Rtl1Q7M732 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC30.4■■■□□ 2.46
Rtl1Q7M732 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtl1Q7M732 AC121598.2-201ENSMUST00000228376 2325 ntBASIC30.4■■■□□ 2.46
Rtl1Q7M732 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Gm11841-201ENSMUST00000117060 1963 ntBASIC30.39■■■□□ 2.46
Rtl1Q7M732 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtl1Q7M732 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Rtl1Q7M732 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Rtl1Q7M732 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC30.39■■■□□ 2.45
Rtl1Q7M732 Gm43294-201ENSMUST00000202850 2490 ntBASIC30.39■■■□□ 2.45
Rtl1Q7M732 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rtl1Q7M732 Gm16401-202ENSMUST00000197463 2074 ntBASIC30.38■■■□□ 2.45
Rtl1Q7M732 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rtl1Q7M732 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rtl1Q7M732 Gm15635-204ENSMUST00000208024 2539 ntBASIC30.38■■■□□ 2.45
Rtl1Q7M732 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rtl1Q7M732 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rtl1Q7M732 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC30.37■■■□□ 2.45
Rtl1Q7M732 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC30.37■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms