Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YGR122C-AYGR122C-A 129 nt-2.75□□□□□ -2.85
HRD1Q08109 YDL159W-AYDL159W-A 132 nt-2.77□□□□□ -2.85
HRD1Q08109 YGL007C-AYGL007C-A 87 nt-2.77□□□□□ -2.85
HRD1Q08109 snR62snR62 100 nt-2.84□□□□□ -2.86
HRD1Q08109 snR61snR61 90 nt-2.86□□□□□ -2.87
HRD1Q08109 YNL103W-AYNL103W-A 90 nt-2.86□□□□□ -2.87
HRD1Q08109 YKL096C-BYKL096C-B 150 nt-2.91□□□□□ -2.88
HRD1Q08109 snR64snR64 101 nt-2.92□□□□□ -2.88
HRD1Q08109 snR87snR87 109 nt-2.93□□□□□ -2.88
HRD1Q08109 YNL170WYNL170W 396 nt-2.96□□□□□ -2.88
HRD1Q08109 Q0032Q0032 291 nt-3.05□□□□□ -2.9
HRD1Q08109 snR58snR58 96 nt-3.1□□□□□ -2.91
HRD1Q08109 YLR294CYLR294C 330 nt-3.14□□□□□ -2.91
HRD1Q08109 YJR162CYJR162C 351 nt-3.22□□□□□ -2.92
HRD1Q08109 YOR225WYOR225W 330 nt-3.22□□□□□ -2.92
HRD1Q08109 snR53snR53 91 nt-3.45□□□□□ -2.96
HRD1Q08109 YLR149C-AYLR149C-A 87 nt-3.49□□□□□ -2.97
HRD1Q08109 tC(GCA)QtC(GCA)Q 76 nt-3.52□□□□□ -2.97
HRD1Q08109 snR40snR40 97 nt-3.53□□□□□ -2.97
HRD1Q08109 YLL066W-BYLL066W-B 171 nt-3.56□□□□□ -2.98
HRD1Q08109 YHR217CYHR217C 462 nt-3.64□□□□□ -2.99
HRD1Q08109 YMR326CYMR326C 309 nt-3.66□□□□□ -3
HRD1Q08109 ATP8Q0080 147 nt-3.71□□□□□ -3
HRD1Q08109 Q0143Q0143 153 nt-3.77□□□□□ -3.01
HRD1Q08109 YJL136W-AYJL136W-A 84 nt-4.01□□□□□ -3.05
HRD1Q08109 YBL109WYBL109W 336 nt-4.08□□□□□ -3.06
HRD1Q08109 Q0092Q0092 141 nt-4.27□□□□□ -3.09
HRD1Q08109 YDL247W-AYDL247W-A 75 nt-4.29□□□□□ -3.1
HRD1Q08109 snR75snR75 89 nt-4.79□□□□□ -3.18
Retrieved 29 of 7,029 protein–RNA pairs in 4 ms