Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 snR77snR77 88 nt-0.24□□□□□ -2.45
VPS36Q06696 snR161snR161 161 nt-0.25□□□□□ -2.45
VPS36Q06696 YHL009W-BYHL009W-B 5409 nt-0.39□□□□□ -2.47
VPS36Q06696 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
VPS36Q06696 snR75snR75 89 nt-0.56□□□□□ -2.5
VPS36Q06696 CDC65tQ(CUG)M 72 nt-0.58□□□□□ -2.5
VPS36Q06696 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
VPS36Q06696 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
VPS36Q06696 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
VPS36Q06696 snR33snR33 183 nt-0.62□□□□□ -2.51
VPS36Q06696 snR6snR6 112 nt-0.67□□□□□ -2.52
VPS36Q06696 YOR335W-AYOR335W-A 81 nt-0.71□□□□□ -2.52
VPS36Q06696 snR40snR40 97 nt-0.73□□□□□ -2.53
VPS36Q06696 YMR315W-AYMR315W-A 108 nt-0.74□□□□□ -2.53
VPS36Q06696 tP(UGG)QtP(UGG)Q 72 nt-0.76□□□□□ -2.53
VPS36Q06696 RPL41BYDL133C-A 78 nt-0.79□□□□□ -2.54
VPS36Q06696 YBR223W-AYBR223W-A 120 nt-0.84□□□□□ -2.54
VPS36Q06696 snR73snR73 106 nt-0.86□□□□□ -2.55
VPS36Q06696 YNR077CYNR077C 255 nt-0.87□□□□□ -2.55
VPS36Q06696 YOR309CYOR309C 381 nt-1□□□□□ -2.57
VPS36Q06696 tY(GUA)QtY(GUA)Q 84 nt-1.19□□□□□ -2.6
VPS36Q06696 snR58snR58 96 nt-1.26□□□□□ -2.61
VPS36Q06696 tC(GCA)QtC(GCA)Q 76 nt-1.29□□□□□ -2.62
VPS36Q06696 snR87snR87 109 nt-1.52□□□□□ -2.65
VPS36Q06696 YBR126W-BYBR126W-B 144 nt-1.56□□□□□ -2.66
VPS36Q06696 YDR543CYDR543C 300 nt-1.92□□□□□ -2.72
VPS36Q06696 YOL166W-AYOL166W-A 156 nt-2.19□□□□□ -2.76
VPS36Q06696 YJR162CYJR162C 351 nt-2.67□□□□□ -2.84
VPS36Q06696 YJL136W-AYJL136W-A 84 nt-3.11□□□□□ -2.91
Retrieved 29 of 7,029 protein–RNA pairs in 27.9 ms