Protein–RNA interactions for Protein: Q05541

NSE3, Non-structural maintenance of chromosome element 3, yeast

Predictions only

Length 303 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	Q05541	snR33	snR33	183 nt		-0.87	□□□□□ -2.55
NSE3	Q05541	YBR223W-A	YBR223W-A	120 nt		-0.96	□□□□□ -2.56
NSE3	Q05541	snR53	snR53	91 nt		-1.06	□□□□□ -2.58
NSE3	Q05541	YGR122C-A	YGR122C-A	129 nt		-1.07	□□□□□ -2.58
NSE3	Q05541	YDL159W-A	YDL159W-A	132 nt		-1.08	□□□□□ -2.58
NSE3	Q05541	snR77	snR77	88 nt		-1.12	□□□□□ -2.59
NSE3	Q05541	YDL114W-A	YDL114W-A	114 nt		-1.14	□□□□□ -2.59
NSE3	Q05541	tP(UGG)Q	tP(UGG)Q	72 nt		-1.2	□□□□□ -2.6
NSE3	Q05541	tV(UAC)Q	tV(UAC)Q	76 nt		-1.25	□□□□□ -2.61
NSE3	Q05541	CDC65	tQ(CUG)M	72 nt		-1.28	□□□□□ -2.61
NSE3	Q05541	YMR315W-A	YMR315W-A	108 nt		-1.48	□□□□□ -2.65
NSE3	Q05541	YLR149C-A	YLR149C-A	87 nt		-1.52	□□□□□ -2.65
NSE3	Q05541	tY(GUA)Q	tY(GUA)Q	84 nt		-1.66	□□□□□ -2.68
NSE3	Q05541	RPL41B	YDL133C-A	78 nt		-1.72	□□□□□ -2.68
NSE3	Q05541	snR6	snR6	112 nt		-1.75	□□□□□ -2.69
NSE3	Q05541	YOR335W-A	YOR335W-A	81 nt		-1.83	□□□□□ -2.7
NSE3	Q05541	YKL096C-B	YKL096C-B	150 nt		-1.86	□□□□□ -2.71
NSE3	Q05541	YOR309C	YOR309C	381 nt		-2	□□□□□ -2.73
NSE3	Q05541	snR73	snR73	106 nt		-2.01	□□□□□ -2.73
NSE3	Q05541	YBR126W-B	YBR126W-B	144 nt		-2.11	□□□□□ -2.75
NSE3	Q05541	YOL166W-A	YOL166W-A	156 nt		-2.13	□□□□□ -2.75
NSE3	Q05541	YDR543C	YDR543C	300 nt		-2.19	□□□□□ -2.76
NSE3	Q05541	snR40	snR40	97 nt		-2.29	□□□□□ -2.78
NSE3	Q05541	snR75	snR75	89 nt		-2.54	□□□□□ -2.82
NSE3	Q05541	snR58	snR58	96 nt		-2.6	□□□□□ -2.83
NSE3	Q05541	tC(GCA)Q	tC(GCA)Q	76 nt		-2.86	□□□□□ -2.87
NSE3	Q05541	snR87	snR87	109 nt		-3.03	□□□□□ -2.89
NSE3	Q05541	YJR162C	YJR162C	351 nt		-3.36	□□□□□ -2.95
NSE3	Q05541	YJL136W-A	YJL136W-A	84 nt		-4.55	□□□□□ -3.14

Retrieved 29 of 7,029 protein–RNA pairs in 41.8 ms