Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 snR77snR77 88 nt-0.44□□□□□ -2.48
GFD1Q04839 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
GFD1Q04839 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
GFD1Q04839 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
GFD1Q04839 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
GFD1Q04839 YHL009W-BYHL009W-B 5409 nt-0.66□□□□□ -2.51
GFD1Q04839 YKL096C-BYKL096C-B 150 nt-0.66□□□□□ -2.52
GFD1Q04839 snR33snR33 183 nt-0.67□□□□□ -2.52
GFD1Q04839 CDC65tQ(CUG)M 72 nt-0.69□□□□□ -2.52
GFD1Q04839 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
GFD1Q04839 snR6snR6 112 nt-0.82□□□□□ -2.54
GFD1Q04839 YMR315W-AYMR315W-A 108 nt-0.86□□□□□ -2.55
GFD1Q04839 YOR335W-AYOR335W-A 81 nt-0.87□□□□□ -2.55
GFD1Q04839 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
GFD1Q04839 snR73snR73 106 nt-1.03□□□□□ -2.57
GFD1Q04839 snR75snR75 89 nt-1.05□□□□□ -2.58
GFD1Q04839 RPL41BYDL133C-A 78 nt-1.05□□□□□ -2.58
GFD1Q04839 snR40snR40 97 nt-1.07□□□□□ -2.58
GFD1Q04839 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
GFD1Q04839 YNR077CYNR077C 255 nt-1.14□□□□□ -2.59
GFD1Q04839 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
GFD1Q04839 snR58snR58 96 nt-1.61□□□□□ -2.67
GFD1Q04839 tC(GCA)QtC(GCA)Q 76 nt-1.67□□□□□ -2.68
GFD1Q04839 snR87snR87 109 nt-1.75□□□□□ -2.69
GFD1Q04839 YBR126W-BYBR126W-B 144 nt-1.76□□□□□ -2.69
GFD1Q04839 YDR543CYDR543C 300 nt-2.1□□□□□ -2.75
GFD1Q04839 YOL166W-AYOL166W-A 156 nt-2.39□□□□□ -2.79
GFD1Q04839 YJR162CYJR162C 351 nt-2.99□□□□□ -2.89
GFD1Q04839 YJL136W-AYJL136W-A 84 nt-3.46□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 21.7 ms