Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 snR77snR77 88 nt-0.48□□□□□ -2.49
LCD1Q04377 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
LCD1Q04377 YKL096C-BYKL096C-B 150 nt-0.63□□□□□ -2.51
LCD1Q04377 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
LCD1Q04377 YNR077CYNR077C 255 nt-0.64□□□□□ -2.51
LCD1Q04377 tT(UGU)G1tT(UGU)G1 72 nt-0.78□□□□□ -2.53
LCD1Q04377 tT(UGU)G2tT(UGU)G2 72 nt-0.78□□□□□ -2.53
LCD1Q04377 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
LCD1Q04377 snR33snR33 183 nt-0.81□□□□□ -2.54
LCD1Q04377 CDC65tQ(CUG)M 72 nt-0.83□□□□□ -2.54
LCD1Q04377 YMR315W-AYMR315W-A 108 nt-1□□□□□ -2.57
LCD1Q04377 YBR223W-AYBR223W-A 120 nt-1□□□□□ -2.57
LCD1Q04377 tP(UGG)QtP(UGG)Q 72 nt-1.01□□□□□ -2.57
LCD1Q04377 snR6snR6 112 nt-1.03□□□□□ -2.57
LCD1Q04377 snR75snR75 89 nt-1.07□□□□□ -2.58
LCD1Q04377 YOR335W-AYOR335W-A 81 nt-1.07□□□□□ -2.58
LCD1Q04377 RPL41BYDL133C-A 78 nt-1.09□□□□□ -2.58
LCD1Q04377 snR40snR40 97 nt-1.18□□□□□ -2.6
LCD1Q04377 snR73snR73 106 nt-1.26□□□□□ -2.61
LCD1Q04377 YOR309CYOR309C 381 nt-1.39□□□□□ -2.63
LCD1Q04377 tY(GUA)QtY(GUA)Q 84 nt-1.54□□□□□ -2.66
LCD1Q04377 snR58snR58 96 nt-1.74□□□□□ -2.69
LCD1Q04377 tC(GCA)QtC(GCA)Q 76 nt-1.84□□□□□ -2.7
LCD1Q04377 YOL166W-AYOL166W-A 156 nt-2.03□□□□□ -2.73
LCD1Q04377 snR87snR87 109 nt-2.1□□□□□ -2.75
LCD1Q04377 YBR126W-BYBR126W-B 144 nt-2.11□□□□□ -2.75
LCD1Q04377 YDR543CYDR543C 300 nt-2.29□□□□□ -2.78
LCD1Q04377 YJR162CYJR162C 351 nt-3.41□□□□□ -2.96
LCD1Q04377 YJL136W-AYJL136W-A 84 nt-4.03□□□□□ -3.05
Retrieved 29 of 7,029 protein–RNA pairs in 88.3 ms