Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
NHX1Q04121 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
NHX1Q04121 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
NHX1Q04121 YDL114W-AYDL114W-A 114 nt-0.68□□□□□ -2.52
NHX1Q04121 snR77snR77 88 nt-0.7□□□□□ -2.52
NHX1Q04121 tV(UAC)QtV(UAC)Q 76 nt-0.73□□□□□ -2.53
NHX1Q04121 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
NHX1Q04121 YLR149C-AYLR149C-A 87 nt-0.81□□□□□ -2.54
NHX1Q04121 CDC65tQ(CUG)M 72 nt-0.84□□□□□ -2.54
NHX1Q04121 YBR223W-AYBR223W-A 120 nt-0.85□□□□□ -2.55
NHX1Q04121 YNR077CYNR077C 255 nt-0.9□□□□□ -2.55
NHX1Q04121 YMR315W-AYMR315W-A 108 nt-0.92□□□□□ -2.56
NHX1Q04121 YKL096C-BYKL096C-B 150 nt-1.09□□□□□ -2.58
NHX1Q04121 tY(GUA)QtY(GUA)Q 84 nt-1.1□□□□□ -2.59
NHX1Q04121 YOR309CYOR309C 381 nt-1.17□□□□□ -2.6
NHX1Q04121 snR6snR6 112 nt-1.19□□□□□ -2.6
NHX1Q04121 YOR335W-AYOR335W-A 81 nt-1.22□□□□□ -2.6
NHX1Q04121 RPL41BYDL133C-A 78 nt-1.24□□□□□ -2.61
NHX1Q04121 snR73snR73 106 nt-1.31□□□□□ -2.62
NHX1Q04121 snR40snR40 97 nt-1.56□□□□□ -2.66
NHX1Q04121 snR75snR75 89 nt-1.61□□□□□ -2.67
NHX1Q04121 YBR126W-BYBR126W-B 144 nt-1.71□□□□□ -2.68
NHX1Q04121 snR58snR58 96 nt-1.82□□□□□ -2.7
NHX1Q04121 snR87snR87 109 nt-1.85□□□□□ -2.71
NHX1Q04121 YDR543CYDR543C 300 nt-1.94□□□□□ -2.72
NHX1Q04121 tC(GCA)QtC(GCA)Q 76 nt-2.01□□□□□ -2.73
NHX1Q04121 YOL166W-AYOL166W-A 156 nt-2.02□□□□□ -2.73
NHX1Q04121 YJR162CYJR162C 351 nt-2.84□□□□□ -2.86
NHX1Q04121 YJL136W-AYJL136W-A 84 nt-2.9□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 3.1 ms