Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 tV(UAC)QtV(UAC)Q 76 nt-2.72□□□□□ -2.84
VPS9P54787 YOR335W-AYOR335W-A 81 nt-2.74□□□□□ -2.85
VPS9P54787 RPL41BYDL133C-A 78 nt-2.85□□□□□ -2.87
VPS9P54787 snR73snR73 106 nt-2.87□□□□□ -2.87
VPS9P54787 YDL159W-AYDL159W-A 132 nt-2.9□□□□□ -2.87
VPS9P54787 YGR122C-AYGR122C-A 129 nt-2.91□□□□□ -2.88
VPS9P54787 ATP8Q0080 147 nt-2.93□□□□□ -2.88
VPS9P54787 snR85snR85 171 nt-2.95□□□□□ -2.88
VPS9P54787 snR64snR64 101 nt-2.97□□□□□ -2.88
VPS9P54787 YDR543CYDR543C 300 nt-3.01□□□□□ -2.89
VPS9P54787 Q0143Q0143 153 nt-3.25□□□□□ -2.93
VPS9P54787 YDR524C-AYDR524C-A 120 nt-3.31□□□□□ -2.94
VPS9P54787 YMR326CYMR326C 309 nt-3.34□□□□□ -2.94
VPS9P54787 YHR217CYHR217C 462 nt-3.35□□□□□ -2.95
VPS9P54787 Q0092Q0092 141 nt-3.43□□□□□ -2.96
VPS9P54787 YLL066W-BYLL066W-B 171 nt-3.44□□□□□ -2.96
VPS9P54787 YOL166W-AYOL166W-A 156 nt-3.48□□□□□ -2.97
VPS9P54787 YKL096C-BYKL096C-B 150 nt-3.55□□□□□ -2.98
VPS9P54787 snR53snR53 91 nt-3.59□□□□□ -2.98
VPS9P54787 YBL109WYBL109W 336 nt-3.7□□□□□ -3
VPS9P54787 snR87snR87 109 nt-3.79□□□□□ -3.02
VPS9P54787 YLR149C-AYLR149C-A 87 nt-3.79□□□□□ -3.02
VPS9P54787 snR58snR58 96 nt-4□□□□□ -3.05
VPS9P54787 YJR162CYJR162C 351 nt-4.02□□□□□ -3.05
VPS9P54787 YDL247W-AYDL247W-A 75 nt-4.12□□□□□ -3.07
VPS9P54787 snR40snR40 97 nt-4.17□□□□□ -3.08
VPS9P54787 tC(GCA)QtC(GCA)Q 76 nt-4.45□□□□□ -3.12
VPS9P54787 YJL136W-AYJL136W-A 84 nt-4.66□□□□□ -3.16
VPS9P54787 snR75snR75 89 nt-5.43□□□□□ -3.28
Retrieved 29 of 7,029 protein–RNA pairs in 8.2 ms