Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 tV(UAC)QtV(UAC)Q 76 nt-1.93□□□□□ -2.72
SUB1P54000 YOR335W-AYOR335W-A 81 nt-1.94□□□□□ -2.72
SUB1P54000 RPL41BYDL133C-A 78 nt-1.97□□□□□ -2.72
SUB1P54000 snR73snR73 106 nt-2.03□□□□□ -2.73
SUB1P54000 YDL159W-AYDL159W-A 132 nt-2.05□□□□□ -2.74
SUB1P54000 snR85snR85 171 nt-2.05□□□□□ -2.74
SUB1P54000 YGR122C-AYGR122C-A 129 nt-2.05□□□□□ -2.74
SUB1P54000 snR64snR64 101 nt-2.1□□□□□ -2.75
SUB1P54000 ATP8Q0080 147 nt-2.13□□□□□ -2.75
SUB1P54000 YDR543CYDR543C 300 nt-2.21□□□□□ -2.76
SUB1P54000 Q0143Q0143 153 nt-2.34□□□□□ -2.78
SUB1P54000 YMR326CYMR326C 309 nt-2.37□□□□□ -2.79
SUB1P54000 YHR217CYHR217C 462 nt-2.4□□□□□ -2.79
SUB1P54000 YLL066W-BYLL066W-B 171 nt-2.44□□□□□ -2.8
SUB1P54000 Q0092Q0092 141 nt-2.47□□□□□ -2.8
SUB1P54000 YKL096C-BYKL096C-B 150 nt-2.49□□□□□ -2.81
SUB1P54000 snR53snR53 91 nt-2.54□□□□□ -2.82
SUB1P54000 YDR524C-AYDR524C-A 120 nt-2.59□□□□□ -2.82
SUB1P54000 YBL109WYBL109W 336 nt-2.67□□□□□ -2.84
SUB1P54000 YLR149C-AYLR149C-A 87 nt-2.69□□□□□ -2.84
SUB1P54000 YOL166W-AYOL166W-A 156 nt-2.7□□□□□ -2.84
SUB1P54000 snR87snR87 109 nt-2.75□□□□□ -2.85
SUB1P54000 snR58snR58 96 nt-2.78□□□□□ -2.85
SUB1P54000 snR40snR40 97 nt-2.91□□□□□ -2.88
SUB1P54000 YDL247W-AYDL247W-A 75 nt-2.92□□□□□ -2.88
SUB1P54000 tC(GCA)QtC(GCA)Q 76 nt-3.1□□□□□ -2.91
SUB1P54000 YJR162CYJR162C 351 nt-3.11□□□□□ -2.91
SUB1P54000 snR75snR75 89 nt-3.8□□□□□ -3.02
SUB1P54000 YJL136W-AYJL136W-A 84 nt-4.05□□□□□ -3.06
Retrieved 29 of 7,029 protein–RNA pairs in 48.9 ms