Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 YOL013W-AYOL013W-A 192 nt0.34□□□□□ -2.36
RCM1P53972 tA(UGC)QtA(UGC)Q 76 nt0.2□□□□□ -2.38
RCM1P53972 YJL113WYJL113W 4647 nt0.13□□□□□ -2.39
RCM1P53972 snR161snR161 161 nt0.09□□□□□ -2.4
RCM1P53972 YOR335W-AYOR335W-A 81 nt-0.11□□□□□ -2.43
RCM1P53972 snR6snR6 112 nt-0.12□□□□□ -2.43
RCM1P53972 RPL41BYDL133C-A 78 nt-0.17□□□□□ -2.44
RCM1P53972 CDC65tQ(CUG)M 72 nt-0.26□□□□□ -2.45
RCM1P53972 snR73snR73 106 nt-0.31□□□□□ -2.46
RCM1P53972 YMR315W-AYMR315W-A 108 nt-0.38□□□□□ -2.47
RCM1P53972 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
RCM1P53972 YHL009W-BYHL009W-B 5409 nt-0.4□□□□□ -2.47
RCM1P53972 tC(GCA)QtC(GCA)Q 76 nt-0.41□□□□□ -2.48
RCM1P53972 snR58snR58 96 nt-0.53□□□□□ -2.49
RCM1P53972 snR33snR33 183 nt-0.56□□□□□ -2.5
RCM1P53972 tP(UGG)QtP(UGG)Q 72 nt-0.58□□□□□ -2.5
RCM1P53972 YOR309CYOR309C 381 nt-0.65□□□□□ -2.51
RCM1P53972 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
RCM1P53972 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
RCM1P53972 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
RCM1P53972 YNR077CYNR077C 255 nt-0.89□□□□□ -2.55
RCM1P53972 snR87snR87 109 nt-0.95□□□□□ -2.56
RCM1P53972 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
RCM1P53972 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
RCM1P53972 YBR126W-BYBR126W-B 144 nt-1.95□□□□□ -2.72
RCM1P53972 YDR543CYDR543C 300 nt-2.25□□□□□ -2.77
RCM1P53972 YOL166W-AYOL166W-A 156 nt-2.32□□□□□ -2.78
RCM1P53972 YJL136W-AYJL136W-A 84 nt-2.66□□□□□ -2.84
RCM1P53972 YJR162CYJR162C 351 nt-3.25□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 34.2 ms