Protein–RNA interactions for Protein: P53953

SFB2, SED5-binding protein 2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB2P53953 snR161snR161 161 nt-0.22□□□□□ -2.44
SFB2P53953 YJL113WYJL113W 4647 nt-0.23□□□□□ -2.45
SFB2P53953 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
SFB2P53953 snR75snR75 89 nt-0.42□□□□□ -2.48
SFB2P53953 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
SFB2P53953 CDC65tQ(CUG)M 72 nt-0.64□□□□□ -2.51
SFB2P53953 snR33snR33 183 nt-0.64□□□□□ -2.51
SFB2P53953 tT(UGU)G1tT(UGU)G1 72 nt-0.68□□□□□ -2.52
SFB2P53953 tT(UGU)G2tT(UGU)G2 72 nt-0.68□□□□□ -2.52
SFB2P53953 tT(UGU)PtT(UGU)P 72 nt-0.68□□□□□ -2.52
SFB2P53953 YMR315W-AYMR315W-A 108 nt-0.72□□□□□ -2.52
SFB2P53953 tP(UGG)QtP(UGG)Q 72 nt-0.74□□□□□ -2.53
SFB2P53953 snR40snR40 97 nt-0.74□□□□□ -2.53
SFB2P53953 RPL41BYDL133C-A 78 nt-0.75□□□□□ -2.53
SFB2P53953 YNR077CYNR077C 255 nt-0.75□□□□□ -2.53
SFB2P53953 YOR335W-AYOR335W-A 81 nt-0.77□□□□□ -2.53
SFB2P53953 snR6snR6 112 nt-0.78□□□□□ -2.53
SFB2P53953 YBR223W-AYBR223W-A 120 nt-0.92□□□□□ -2.56
SFB2P53953 snR73snR73 106 nt-0.94□□□□□ -2.56
SFB2P53953 YOR309CYOR309C 381 nt-1.04□□□□□ -2.58
SFB2P53953 tY(GUA)QtY(GUA)Q 84 nt-1.23□□□□□ -2.61
SFB2P53953 snR58snR58 96 nt-1.3□□□□□ -2.62
SFB2P53953 tC(GCA)QtC(GCA)Q 76 nt-1.36□□□□□ -2.63
SFB2P53953 snR87snR87 109 nt-1.6□□□□□ -2.67
SFB2P53953 YBR126W-BYBR126W-B 144 nt-1.75□□□□□ -2.69
SFB2P53953 YDR543CYDR543C 300 nt-2.15□□□□□ -2.75
SFB2P53953 YOL166W-AYOL166W-A 156 nt-2.24□□□□□ -2.77
SFB2P53953 YJR162CYJR162C 351 nt-3.01□□□□□ -2.89
SFB2P53953 YJL136W-AYJL136W-A 84 nt-3.13□□□□□ -2.91
Retrieved 29 of 7,029 protein–RNA pairs in 67 ms