Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 YDL159W-AYDL159W-A 132 nt-0.58□□□□□ -2.5
TDA7P53882 tP(UGG)QtP(UGG)Q 72 nt-0.61□□□□□ -2.51
TDA7P53882 snR53snR53 91 nt-0.62□□□□□ -2.51
TDA7P53882 YGR122C-AYGR122C-A 129 nt-0.63□□□□□ -2.51
TDA7P53882 snR77snR77 88 nt-0.7□□□□□ -2.52
TDA7P53882 YDL114W-AYDL114W-A 114 nt-0.71□□□□□ -2.52
TDA7P53882 tV(UAC)QtV(UAC)Q 76 nt-0.74□□□□□ -2.53
TDA7P53882 YBR223W-AYBR223W-A 120 nt-0.75□□□□□ -2.53
TDA7P53882 CDC65tQ(CUG)M 72 nt-0.82□□□□□ -2.54
TDA7P53882 YNR077CYNR077C 255 nt-0.87□□□□□ -2.55
TDA7P53882 YLR149C-AYLR149C-A 87 nt-0.89□□□□□ -2.55
TDA7P53882 tY(GUA)QtY(GUA)Q 84 nt-0.9□□□□□ -2.55
TDA7P53882 YMR315W-AYMR315W-A 108 nt-0.97□□□□□ -2.56
TDA7P53882 snR6snR6 112 nt-1.08□□□□□ -2.58
TDA7P53882 YOR309CYOR309C 381 nt-1.08□□□□□ -2.58
TDA7P53882 YOR335W-AYOR335W-A 81 nt-1.14□□□□□ -2.59
TDA7P53882 RPL41BYDL133C-A 78 nt-1.17□□□□□ -2.6
TDA7P53882 YKL096C-BYKL096C-B 150 nt-1.18□□□□□ -2.6
TDA7P53882 YBR126W-BYBR126W-B 144 nt-1.26□□□□□ -2.61
TDA7P53882 snR73snR73 106 nt-1.27□□□□□ -2.61
TDA7P53882 snR40snR40 97 nt-1.46□□□□□ -2.64
TDA7P53882 snR75snR75 89 nt-1.62□□□□□ -2.67
TDA7P53882 YDR543CYDR543C 300 nt-1.68□□□□□ -2.68
TDA7P53882 snR58snR58 96 nt-1.76□□□□□ -2.69
TDA7P53882 snR87snR87 109 nt-1.82□□□□□ -2.7
TDA7P53882 tC(GCA)QtC(GCA)Q 76 nt-1.9□□□□□ -2.71
TDA7P53882 YOL166W-AYOL166W-A 156 nt-2.13□□□□□ -2.75
TDA7P53882 YJR162CYJR162C 351 nt-2.29□□□□□ -2.78
TDA7P53882 YJL136W-AYJL136W-A 84 nt-2.45□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms