Protein–RNA interactions for Protein: P53165

SGF73, SAGA-associated factor 73, yeastyeast

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF73P53165 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
SGF73P53165 snR53snR53 91 nt-0.58□□□□□ -2.5
SGF73P53165 YGR122C-AYGR122C-A 129 nt-0.63□□□□□ -2.51
SGF73P53165 snR77snR77 88 nt-0.7□□□□□ -2.52
SGF73P53165 YDL114W-AYDL114W-A 114 nt-0.71□□□□□ -2.52
SGF73P53165 YNR077CYNR077C 255 nt-0.72□□□□□ -2.52
SGF73P53165 tV(UAC)QtV(UAC)Q 76 nt-0.74□□□□□ -2.53
SGF73P53165 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
SGF73P53165 CDC65tQ(CUG)M 72 nt-0.82□□□□□ -2.54
SGF73P53165 YBR223W-AYBR223W-A 120 nt-0.83□□□□□ -2.54
SGF73P53165 YLR149C-AYLR149C-A 87 nt-0.88□□□□□ -2.55
SGF73P53165 YMR315W-AYMR315W-A 108 nt-0.89□□□□□ -2.55
SGF73P53165 tY(GUA)QtY(GUA)Q 84 nt-1.08□□□□□ -2.58
SGF73P53165 RPL41BYDL133C-A 78 nt-1.1□□□□□ -2.59
SGF73P53165 YOR335W-AYOR335W-A 81 nt-1.1□□□□□ -2.59
SGF73P53165 snR6snR6 112 nt-1.11□□□□□ -2.59
SGF73P53165 YKL096C-BYKL096C-B 150 nt-1.15□□□□□ -2.59
SGF73P53165 YOR309CYOR309C 381 nt-1.21□□□□□ -2.6
SGF73P53165 snR73snR73 106 nt-1.25□□□□□ -2.61
SGF73P53165 snR40snR40 97 nt-1.42□□□□□ -2.64
SGF73P53165 YBR126W-BYBR126W-B 144 nt-1.45□□□□□ -2.64
SGF73P53165 snR75snR75 89 nt-1.61□□□□□ -2.67
SGF73P53165 snR58snR58 96 nt-1.73□□□□□ -2.69
SGF73P53165 tC(GCA)QtC(GCA)Q 76 nt-1.86□□□□□ -2.71
SGF73P53165 snR87snR87 109 nt-1.89□□□□□ -2.71
SGF73P53165 YDR543CYDR543C 300 nt-1.89□□□□□ -2.71
SGF73P53165 YOL166W-AYOL166W-A 156 nt-1.89□□□□□ -2.71
SGF73P53165 YJR162CYJR162C 351 nt-2.61□□□□□ -2.83
SGF73P53165 YJL136W-AYJL136W-A 84 nt-3.05□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 33.8 ms