Protein–RNA interactions for Protein: P48237

CCM1, Mitochondrial group I intron splicing factor CCM1, yeastyeast

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCM1P48237 snR77snR77 88 nt-0.42□□□□□ -2.48
CCM1P48237 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
CCM1P48237 YKL096C-BYKL096C-B 150 nt-0.54□□□□□ -2.5
CCM1P48237 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
CCM1P48237 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
CCM1P48237 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
CCM1P48237 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
CCM1P48237 snR33snR33 183 nt-0.72□□□□□ -2.52
CCM1P48237 CDC65tQ(CUG)M 72 nt-0.79□□□□□ -2.54
CCM1P48237 tP(UGG)QtP(UGG)Q 72 nt-0.9□□□□□ -2.55
CCM1P48237 snR6snR6 112 nt-0.95□□□□□ -2.56
CCM1P48237 YMR315W-AYMR315W-A 108 nt-0.96□□□□□ -2.56
CCM1P48237 snR75snR75 89 nt-0.97□□□□□ -2.56
CCM1P48237 YNR077CYNR077C 255 nt-0.99□□□□□ -2.57
CCM1P48237 YOR335W-AYOR335W-A 81 nt-1□□□□□ -2.57
CCM1P48237 YBR223W-AYBR223W-A 120 nt-1.01□□□□□ -2.57
CCM1P48237 RPL41BYDL133C-A 78 nt-1.06□□□□□ -2.58
CCM1P48237 snR40snR40 97 nt-1.09□□□□□ -2.58
CCM1P48237 snR73snR73 106 nt-1.18□□□□□ -2.6
CCM1P48237 YOR309CYOR309C 381 nt-1.32□□□□□ -2.62
CCM1P48237 tY(GUA)QtY(GUA)Q 84 nt-1.37□□□□□ -2.63
CCM1P48237 snR58snR58 96 nt-1.69□□□□□ -2.68
CCM1P48237 tC(GCA)QtC(GCA)Q 76 nt-1.77□□□□□ -2.69
CCM1P48237 YBR126W-BYBR126W-B 144 nt-1.8□□□□□ -2.7
CCM1P48237 snR87snR87 109 nt-2.01□□□□□ -2.73
CCM1P48237 YDR543CYDR543C 300 nt-2.26□□□□□ -2.77
CCM1P48237 YOL166W-AYOL166W-A 156 nt-2.67□□□□□ -2.84
CCM1P48237 YJR162CYJR162C 351 nt-3.16□□□□□ -2.92
CCM1P48237 YJL136W-AYJL136W-A 84 nt-3.66□□□□□ -3
Retrieved 29 of 7,029 protein–RNA pairs in 3.7 ms