Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 tM(CAU)Q1tM(CAU)Q1 76 nt-3.28□□□□□ -2.93
TY4B-JP47024 snR87snR87 109 nt-3.3□□□□□ -2.94
TY4B-JP47024 snR58snR58 96 nt-3.33□□□□□ -2.94
TY4B-JP47024 YGL007C-AYGL007C-A 87 nt-3.35□□□□□ -2.95
TY4B-JP47024 YKL096C-BYKL096C-B 150 nt-3.4□□□□□ -2.95
TY4B-JP47024 snR62snR62 100 nt-3.41□□□□□ -2.96
TY4B-JP47024 YNL103W-AYNL103W-A 90 nt-3.42□□□□□ -2.96
TY4B-JP47024 YNL338WYNL338W 159 nt-3.43□□□□□ -2.96
TY4B-JP47024 YNL170WYNL170W 396 nt-3.48□□□□□ -2.97
TY4B-JP47024 YGL041C-BYGL041C-B 183 nt-3.5□□□□□ -2.97
TY4B-JP47024 snR64snR64 101 nt-3.52□□□□□ -2.97
TY4B-JP47024 snR61snR61 90 nt-3.57□□□□□ -2.98
TY4B-JP47024 YOR225WYOR225W 330 nt-3.6□□□□□ -2.99
TY4B-JP47024 Q0032Q0032 291 nt-3.75□□□□□ -3.01
TY4B-JP47024 YLR294CYLR294C 330 nt-3.77□□□□□ -3.01
TY4B-JP47024 snR40snR40 97 nt-3.84□□□□□ -3.02
TY4B-JP47024 tC(GCA)QtC(GCA)Q 76 nt-3.9□□□□□ -3.03
TY4B-JP47024 snR53snR53 91 nt-4.05□□□□□ -3.06
TY4B-JP47024 YLR149C-AYLR149C-A 87 nt-4.09□□□□□ -3.06
TY4B-JP47024 YJL136W-AYJL136W-A 84 nt-4.18□□□□□ -3.08
TY4B-JP47024 YMR326CYMR326C 309 nt-4.3□□□□□ -3.1
TY4B-JP47024 YLL066W-BYLL066W-B 171 nt-4.31□□□□□ -3.1
TY4B-JP47024 YHR217CYHR217C 462 nt-4.38□□□□□ -3.11
TY4B-JP47024 Q0143Q0143 153 nt-4.61□□□□□ -3.15
TY4B-JP47024 ATP8Q0080 147 nt-4.62□□□□□ -3.15
TY4B-JP47024 YBL109WYBL109W 336 nt-5.07□□□□□ -3.22
TY4B-JP47024 YDL247W-AYDL247W-A 75 nt-5.11□□□□□ -3.23
TY4B-JP47024 Q0092Q0092 141 nt-5.2□□□□□ -3.24
TY4B-JP47024 snR75snR75 89 nt-5.46□□□□□ -3.28
Retrieved 29 of 7,029 protein–RNA pairs in 7 ms