Protein–RNA interactions for Protein: P42826

XKS1, Xylulose kinase, yeastyeast

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XKS1P42826 YJL113WYJL113W 4647 nt0.04□□□□□ -2.4
XKS1P42826 snR77snR77 88 nt0.01□□□□□ -2.41
XKS1P42826 snR161snR161 161 nt-0.13□□□□□ -2.43
XKS1P42826 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
XKS1P42826 snR40snR40 97 nt-0.38□□□□□ -2.47
XKS1P42826 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
XKS1P42826 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
XKS1P42826 snR6snR6 112 nt-0.6□□□□□ -2.51
XKS1P42826 RPL41BYDL133C-A 78 nt-0.6□□□□□ -2.51
XKS1P42826 YOR335W-AYOR335W-A 81 nt-0.64□□□□□ -2.51
XKS1P42826 snR33snR33 183 nt-0.7□□□□□ -2.52
XKS1P42826 YMR315W-AYMR315W-A 108 nt-0.71□□□□□ -2.52
XKS1P42826 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
XKS1P42826 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
XKS1P42826 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
XKS1P42826 snR73snR73 106 nt-0.82□□□□□ -2.54
XKS1P42826 YNR077CYNR077C 255 nt-0.84□□□□□ -2.54
XKS1P42826 tP(UGG)QtP(UGG)Q 72 nt-0.86□□□□□ -2.55
XKS1P42826 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
XKS1P42826 YOR309CYOR309C 381 nt-1.09□□□□□ -2.58
XKS1P42826 snR58snR58 96 nt-1.1□□□□□ -2.59
XKS1P42826 tC(GCA)QtC(GCA)Q 76 nt-1.12□□□□□ -2.59
XKS1P42826 tY(GUA)QtY(GUA)Q 84 nt-1.32□□□□□ -2.62
XKS1P42826 snR87snR87 109 nt-1.6□□□□□ -2.67
XKS1P42826 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
XKS1P42826 YDR543CYDR543C 300 nt-2.46□□□□□ -2.8
XKS1P42826 YOL166W-AYOL166W-A 156 nt-2.46□□□□□ -2.8
XKS1P42826 YJL136W-AYJL136W-A 84 nt-3.47□□□□□ -2.96
XKS1P42826 YJR162CYJR162C 351 nt-3.62□□□□□ -2.99
Retrieved 29 of 7,029 protein–RNA pairs in 5.7 ms