Protein–RNA interactions for Protein: P40509

SEC28, Coatomer subunit epsilon, yeastyeast

Known RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC28P40509 YNL170WYNL170W 396 nt-2.77□□□□□ -2.85
SEC28P40509 RPL41BYDL133C-A 78 nt-2.82□□□□□ -2.86
SEC28P40509 YDR543CYDR543C 300 nt-2.82□□□□□ -2.86
SEC28P40509 YOR335W-AYOR335W-A 81 nt-2.86□□□□□ -2.87
SEC28P40509 snR73snR73 106 nt-2.93□□□□□ -2.88
SEC28P40509 snR85snR85 171 nt-2.93□□□□□ -2.88
SEC28P40509 YGR122C-AYGR122C-A 129 nt-3.01□□□□□ -2.89
SEC28P40509 snR64snR64 101 nt-3.03□□□□□ -2.89
SEC28P40509 YDL159W-AYDL159W-A 132 nt-3.05□□□□□ -2.9
SEC28P40509 ATP8Q0080 147 nt-3.05□□□□□ -2.9
SEC28P40509 YOL166W-AYOL166W-A 156 nt-3.24□□□□□ -2.93
SEC28P40509 YMR326CYMR326C 309 nt-3.35□□□□□ -2.95
SEC28P40509 Q0143Q0143 153 nt-3.36□□□□□ -2.95
SEC28P40509 YHR217CYHR217C 462 nt-3.42□□□□□ -2.96
SEC28P40509 YDR524C-AYDR524C-A 120 nt-3.46□□□□□ -2.96
SEC28P40509 YLL066W-BYLL066W-B 171 nt-3.55□□□□□ -2.98
SEC28P40509 Q0092Q0092 141 nt-3.57□□□□□ -2.98
SEC28P40509 YKL096C-BYKL096C-B 150 nt-3.6□□□□□ -2.99
SEC28P40509 snR53snR53 91 nt-3.62□□□□□ -2.99
SEC28P40509 snR87snR87 109 nt-3.81□□□□□ -3.02
SEC28P40509 YLR149C-AYLR149C-A 87 nt-3.86□□□□□ -3.03
SEC28P40509 snR58snR58 96 nt-3.91□□□□□ -3.04
SEC28P40509 YJR162CYJR162C 351 nt-3.91□□□□□ -3.04
SEC28P40509 YBL109WYBL109W 336 nt-3.92□□□□□ -3.04
SEC28P40509 YDL247W-AYDL247W-A 75 nt-4.17□□□□□ -3.08
SEC28P40509 snR40snR40 97 nt-4.23□□□□□ -3.09
SEC28P40509 tC(GCA)QtC(GCA)Q 76 nt-4.43□□□□□ -3.12
SEC28P40509 YJL136W-AYJL136W-A 84 nt-5.06□□□□□ -3.22
SEC28P40509 snR75snR75 89 nt-5.48□□□□□ -3.29
Retrieved 29 of 7,029 protein–RNA pairs in 29.5 ms