Protein–RNA interactions for Protein: P40489

XBP1, Transcriptional repressor XBP1, yeastyeast

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XBP1P40489 tA(UGC)QtA(UGC)Q 76 nt0.08□□□□□ -2.4
XBP1P40489 YJL113WYJL113W 4647 nt-0.04□□□□□ -2.42
XBP1P40489 snR161snR161 161 nt-0.06□□□□□ -2.42
XBP1P40489 snR40snR40 97 nt-0.13□□□□□ -2.43
XBP1P40489 snR6snR6 112 nt-0.31□□□□□ -2.46
XBP1P40489 YHL009W-BYHL009W-B 5409 nt-0.31□□□□□ -2.46
XBP1P40489 YOR335W-AYOR335W-A 81 nt-0.33□□□□□ -2.46
XBP1P40489 CDC65tQ(CUG)M 72 nt-0.34□□□□□ -2.46
XBP1P40489 RPL41BYDL133C-A 78 nt-0.4□□□□□ -2.47
XBP1P40489 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
XBP1P40489 YMR315W-AYMR315W-A 108 nt-0.45□□□□□ -2.48
XBP1P40489 snR73snR73 106 nt-0.47□□□□□ -2.48
XBP1P40489 snR33snR33 183 nt-0.5□□□□□ -2.49
XBP1P40489 tP(UGG)QtP(UGG)Q 72 nt-0.56□□□□□ -2.5
XBP1P40489 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
XBP1P40489 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
XBP1P40489 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
XBP1P40489 YOR309CYOR309C 381 nt-0.68□□□□□ -2.52
XBP1P40489 tC(GCA)QtC(GCA)Q 76 nt-0.7□□□□□ -2.52
XBP1P40489 snR58snR58 96 nt-0.73□□□□□ -2.53
XBP1P40489 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
XBP1P40489 YNR077CYNR077C 255 nt-0.92□□□□□ -2.56
XBP1P40489 tY(GUA)QtY(GUA)Q 84 nt-0.95□□□□□ -2.56
XBP1P40489 snR87snR87 109 nt-1.02□□□□□ -2.57
XBP1P40489 YBR126W-BYBR126W-B 144 nt-1.66□□□□□ -2.68
XBP1P40489 YDR543CYDR543C 300 nt-2.04□□□□□ -2.74
XBP1P40489 YOL166W-AYOL166W-A 156 nt-2.23□□□□□ -2.77
XBP1P40489 YJL136W-AYJL136W-A 84 nt-2.41□□□□□ -2.8
XBP1P40489 YJR162CYJR162C 351 nt-2.92□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 43.5 ms