Protein–RNA interactions for Protein: P40486

SHQ1, Protein SHQ1, yeastyeast

Predicted RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHQ1P40486 YOR335W-AYOR335W-A 81 nt-2.12□□□□□ -2.75
SHQ1P40486 tV(UAC)QtV(UAC)Q 76 nt-2.13□□□□□ -2.75
SHQ1P40486 YGR122C-AYGR122C-A 129 nt-2.19□□□□□ -2.76
SHQ1P40486 snR85snR85 171 nt-2.2□□□□□ -2.76
SHQ1P40486 YDL159W-AYDL159W-A 132 nt-2.23□□□□□ -2.77
SHQ1P40486 snR73snR73 106 nt-2.24□□□□□ -2.77
SHQ1P40486 ATP8Q0080 147 nt-2.25□□□□□ -2.77
SHQ1P40486 snR64snR64 101 nt-2.27□□□□□ -2.77
SHQ1P40486 YBR126W-BYBR126W-B 144 nt-2.29□□□□□ -2.78
SHQ1P40486 Q0143Q0143 153 nt-2.5□□□□□ -2.81
SHQ1P40486 YMR326CYMR326C 309 nt-2.52□□□□□ -2.81
SHQ1P40486 YHR217CYHR217C 462 nt-2.57□□□□□ -2.82
SHQ1P40486 Q0092Q0092 141 nt-2.6□□□□□ -2.83
SHQ1P40486 YLL066W-BYLL066W-B 171 nt-2.61□□□□□ -2.83
SHQ1P40486 YKL096C-BYKL096C-B 150 nt-2.7□□□□□ -2.84
SHQ1P40486 snR53snR53 91 nt-2.77□□□□□ -2.85
SHQ1P40486 YDR524C-AYDR524C-A 120 nt-2.82□□□□□ -2.86
SHQ1P40486 YDR543CYDR543C 300 nt-2.82□□□□□ -2.86
SHQ1P40486 YBL109WYBL109W 336 nt-2.86□□□□□ -2.87
SHQ1P40486 YLR149C-AYLR149C-A 87 nt-2.94□□□□□ -2.88
SHQ1P40486 YOL166W-AYOL166W-A 156 nt-2.96□□□□□ -2.88
SHQ1P40486 snR58snR58 96 nt-3.02□□□□□ -2.89
SHQ1P40486 snR87snR87 109 nt-3.03□□□□□ -2.89
SHQ1P40486 YDL247W-AYDL247W-A 75 nt-3.1□□□□□ -2.91
SHQ1P40486 snR40snR40 97 nt-3.16□□□□□ -2.92
SHQ1P40486 tC(GCA)QtC(GCA)Q 76 nt-3.38□□□□□ -2.95
SHQ1P40486 YJR162CYJR162C 351 nt-3.93□□□□□ -3.04
SHQ1P40486 snR75snR75 89 nt-4.1□□□□□ -3.07
SHQ1P40486 YJL136W-AYJL136W-A 84 nt-4.43□□□□□ -3.12
Retrieved 29 of 7,029 protein–RNA pairs in 63.5 ms