Protein–RNA interactions for Protein: P40080

VFA1, VPS4-associated protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VFA1P40080 YDL159W-AYDL159W-A 132 nt-0.75□□□□□ -2.53
VFA1P40080 snR33snR33 183 nt-0.75□□□□□ -2.53
VFA1P40080 snR77snR77 88 nt-0.82□□□□□ -2.54
VFA1P40080 YGR122C-AYGR122C-A 129 nt-0.83□□□□□ -2.54
VFA1P40080 snR53snR53 91 nt-0.86□□□□□ -2.55
VFA1P40080 YDL114W-AYDL114W-A 114 nt-0.9□□□□□ -2.55
VFA1P40080 CDC65tQ(CUG)M 72 nt-0.9□□□□□ -2.55
VFA1P40080 tV(UAC)QtV(UAC)Q 76 nt-0.9□□□□□ -2.55
VFA1P40080 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
VFA1P40080 tP(UGG)QtP(UGG)Q 72 nt-0.95□□□□□ -2.56
VFA1P40080 YMR315W-AYMR315W-A 108 nt-1.08□□□□□ -2.58
VFA1P40080 YLR149C-AYLR149C-A 87 nt-1.13□□□□□ -2.59
VFA1P40080 snR6snR6 112 nt-1.21□□□□□ -2.6
VFA1P40080 YOR335W-AYOR335W-A 81 nt-1.28□□□□□ -2.61
VFA1P40080 RPL41BYDL133C-A 78 nt-1.37□□□□□ -2.63
VFA1P40080 YOR309CYOR309C 381 nt-1.38□□□□□ -2.63
VFA1P40080 snR73snR73 106 nt-1.41□□□□□ -2.64
VFA1P40080 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
VFA1P40080 YKL096C-BYKL096C-B 150 nt-1.5□□□□□ -2.65
VFA1P40080 snR40snR40 97 nt-1.71□□□□□ -2.68
VFA1P40080 snR75snR75 89 nt-1.98□□□□□ -2.73
VFA1P40080 snR58snR58 96 nt-2.02□□□□□ -2.73
VFA1P40080 YOL166W-AYOL166W-A 156 nt-2.02□□□□□ -2.73
VFA1P40080 YBR126W-BYBR126W-B 144 nt-2.06□□□□□ -2.74
VFA1P40080 YDR543CYDR543C 300 nt-2.11□□□□□ -2.75
VFA1P40080 snR87snR87 109 nt-2.15□□□□□ -2.75
VFA1P40080 tC(GCA)QtC(GCA)Q 76 nt-2.18□□□□□ -2.76
VFA1P40080 YJR162CYJR162C 351 nt-3.26□□□□□ -2.93
VFA1P40080 YJL136W-AYJL136W-A 84 nt-3.77□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 6.8 ms