Protein–RNA interactions for Protein: P40072

SLX8, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX8P40072 snR40snR40 97 nt0.34□□□□□ -2.36
SLX8P40072 tA(UGC)QtA(UGC)Q 76 nt0.21□□□□□ -2.38
SLX8P40072 snR161snR161 161 nt0.12□□□□□ -2.39
SLX8P40072 YJL113WYJL113W 4647 nt0.07□□□□□ -2.4
SLX8P40072 RPL41BYDL133C-A 78 nt-0.18□□□□□ -2.44
SLX8P40072 YOR335W-AYOR335W-A 81 nt-0.25□□□□□ -2.45
SLX8P40072 snR6snR6 112 nt-0.28□□□□□ -2.45
SLX8P40072 CDC65tQ(CUG)M 72 nt-0.38□□□□□ -2.47
SLX8P40072 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
SLX8P40072 YHL009W-BYHL009W-B 5409 nt-0.44□□□□□ -2.48
SLX8P40072 snR73snR73 106 nt-0.48□□□□□ -2.49
SLX8P40072 YMR315W-AYMR315W-A 108 nt-0.48□□□□□ -2.49
SLX8P40072 tC(GCA)QtC(GCA)Q 76 nt-0.54□□□□□ -2.5
SLX8P40072 snR58snR58 96 nt-0.63□□□□□ -2.51
SLX8P40072 snR33snR33 183 nt-0.66□□□□□ -2.52
SLX8P40072 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
SLX8P40072 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
SLX8P40072 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
SLX8P40072 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
SLX8P40072 YNR077CYNR077C 255 nt-0.8□□□□□ -2.54
SLX8P40072 YOR309CYOR309C 381 nt-0.86□□□□□ -2.55
SLX8P40072 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
SLX8P40072 snR87snR87 109 nt-1.24□□□□□ -2.61
SLX8P40072 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
SLX8P40072 YBR126W-BYBR126W-B 144 nt-1.71□□□□□ -2.68
SLX8P40072 YDR543CYDR543C 300 nt-2.15□□□□□ -2.75
SLX8P40072 YOL166W-AYOL166W-A 156 nt-2.38□□□□□ -2.79
SLX8P40072 YJR162CYJR162C 351 nt-2.95□□□□□ -2.88
SLX8P40072 YJL136W-AYJL136W-A 84 nt-3.18□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms