Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 YDL114W-AYDL114W-A 114 nt-0.73□□□□□ -2.53
VAC8P39968 snR77snR77 88 nt-0.75□□□□□ -2.53
VAC8P39968 tT(UGU)G1tT(UGU)G1 72 nt-0.78□□□□□ -2.53
VAC8P39968 tT(UGU)G2tT(UGU)G2 72 nt-0.78□□□□□ -2.53
VAC8P39968 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
VAC8P39968 tV(UAC)QtV(UAC)Q 76 nt-0.86□□□□□ -2.55
VAC8P39968 tP(UGG)QtP(UGG)Q 72 nt-0.88□□□□□ -2.55
VAC8P39968 CDC65tQ(CUG)M 72 nt-0.95□□□□□ -2.56
VAC8P39968 YLR149C-AYLR149C-A 87 nt-0.99□□□□□ -2.57
VAC8P39968 YMR315W-AYMR315W-A 108 nt-1.05□□□□□ -2.58
VAC8P39968 YBR223W-AYBR223W-A 120 nt-1.09□□□□□ -2.58
VAC8P39968 RPL41BYDL133C-A 78 nt-1.19□□□□□ -2.6
VAC8P39968 YKL096C-BYKL096C-B 150 nt-1.21□□□□□ -2.6
VAC8P39968 tY(GUA)QtY(GUA)Q 84 nt-1.25□□□□□ -2.61
VAC8P39968 YNR077CYNR077C 255 nt-1.27□□□□□ -2.61
VAC8P39968 snR6snR6 112 nt-1.29□□□□□ -2.62
VAC8P39968 YOR335W-AYOR335W-A 81 nt-1.3□□□□□ -2.62
VAC8P39968 YOR309CYOR309C 381 nt-1.36□□□□□ -2.63
VAC8P39968 snR73snR73 106 nt-1.47□□□□□ -2.64
VAC8P39968 snR40snR40 97 nt-1.57□□□□□ -2.66
VAC8P39968 snR75snR75 89 nt-1.68□□□□□ -2.68
VAC8P39968 YBR126W-BYBR126W-B 144 nt-1.87□□□□□ -2.71
VAC8P39968 snR58snR58 96 nt-1.89□□□□□ -2.71
VAC8P39968 tC(GCA)QtC(GCA)Q 76 nt-2.05□□□□□ -2.74
VAC8P39968 snR87snR87 109 nt-2.2□□□□□ -2.76
VAC8P39968 YDR543CYDR543C 300 nt-2.5□□□□□ -2.81
VAC8P39968 YOL166W-AYOL166W-A 156 nt-2.76□□□□□ -2.85
VAC8P39968 YJL136W-AYJL136W-A 84 nt-3.43□□□□□ -2.96
VAC8P39968 YJR162CYJR162C 351 nt-3.59□□□□□ -2.98
Retrieved 29 of 7,029 protein–RNA pairs in 7.7 ms