Protein–RNA interactions for Protein: P39005

KRE9, Cell wall synthesis protein KRE9, yeast

Predictions only

Length 276 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE9	P39005	YKL096C-B	YKL096C-B	150 nt		-0.32	□□□□□ -2.46
KRE9	P39005	URB1	YKL014C	5295 nt		-0.45	□□□□□ -2.48
KRE9	P39005	YHL009W-B	YHL009W-B	5409 nt		-0.52	□□□□□ -2.49
KRE9	P39005	YJL113W	YJL113W	4647 nt		-0.52	□□□□□ -2.49
KRE9	P39005	snR33	snR33	183 nt		-0.53	□□□□□ -2.49
KRE9	P39005	CDC65	tQ(CUG)M	72 nt		-0.56	□□□□□ -2.5
KRE9	P39005	snR75	snR75	89 nt		-0.58	□□□□□ -2.5
KRE9	P39005	RPL41B	YDL133C-A	78 nt		-0.62	□□□□□ -2.51
KRE9	P39005	YMR315W-A	YMR315W-A	108 nt		-0.62	□□□□□ -2.51
KRE9	P39005	tP(UGG)Q	tP(UGG)Q	72 nt		-0.66	□□□□□ -2.52
KRE9	P39005	YOR335W-A	YOR335W-A	81 nt		-0.7	□□□□□ -2.52
KRE9	P39005	snR40	snR40	97 nt		-0.7	□□□□□ -2.52
KRE9	P39005	snR6	snR6	112 nt		-0.71	□□□□□ -2.52
KRE9	P39005	tT(UGU)G1	tT(UGU)G1	72 nt		-0.8	□□□□□ -2.54
KRE9	P39005	tT(UGU)G2	tT(UGU)G2	72 nt		-0.8	□□□□□ -2.54
KRE9	P39005	tT(UGU)P	tT(UGU)P	72 nt		-0.8	□□□□□ -2.54
KRE9	P39005	snR73	snR73	106 nt		-0.83	□□□□□ -2.54
KRE9	P39005	YOR309C	YOR309C	381 nt		-0.92	□□□□□ -2.56
KRE9	P39005	tY(GUA)Q	tY(GUA)Q	84 nt		-1.01	□□□□□ -2.57
KRE9	P39005	snR58	snR58	96 nt		-1.08	□□□□□ -2.58
KRE9	P39005	YBR223W-A	YBR223W-A	120 nt		-1.13	□□□□□ -2.59
KRE9	P39005	tC(GCA)Q	tC(GCA)Q	76 nt		-1.14	□□□□□ -2.59
KRE9	P39005	YNR077C	YNR077C	255 nt		-1.33	□□□□□ -2.62
KRE9	P39005	snR87	snR87	109 nt		-1.38	□□□□□ -2.63
KRE9	P39005	YBR126W-B	YBR126W-B	144 nt		-1.71	□□□□□ -2.68
KRE9	P39005	YDR543C	YDR543C	300 nt		-2.6	□□□□□ -2.83
KRE9	P39005	YJL136W-A	YJL136W-A	84 nt		-2.6	□□□□□ -2.83
KRE9	P39005	YOL166W-A	YOL166W-A	156 nt		-2.99	□□□□□ -2.89
KRE9	P39005	YJR162C	YJR162C	351 nt		-3.4	□□□□□ -2.95

Retrieved 29 of 7,029 protein–RNA pairs in 78.3 ms