Protein–RNA interactions for Protein: P38815

YPT35, PX domain-containing protein YPT35, yeastyeast

Known RBP Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPT35P38815 YHL009W-BYHL009W-B 5409 nt-0.44□□□□□ -2.48
YPT35P38815 tV(UAC)QtV(UAC)Q 76 nt-0.45□□□□□ -2.48
YPT35P38815 YDL114W-AYDL114W-A 114 nt-0.47□□□□□ -2.48
YPT35P38815 tP(UGG)QtP(UGG)Q 72 nt-0.47□□□□□ -2.48
YPT35P38815 snR53snR53 91 nt-0.47□□□□□ -2.48
YPT35P38815 CDC65tQ(CUG)M 72 nt-0.48□□□□□ -2.49
YPT35P38815 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
YPT35P38815 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
YPT35P38815 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
YPT35P38815 YMR315W-AYMR315W-A 108 nt-0.56□□□□□ -2.5
YPT35P38815 YLR149C-AYLR149C-A 87 nt-0.58□□□□□ -2.5
YPT35P38815 snR6snR6 112 nt-0.61□□□□□ -2.51
YPT35P38815 YOR335W-AYOR335W-A 81 nt-0.63□□□□□ -2.51
YPT35P38815 YOR309CYOR309C 381 nt-0.69□□□□□ -2.52
YPT35P38815 snR73snR73 106 nt-0.72□□□□□ -2.52
YPT35P38815 RPL41BYDL133C-A 78 nt-0.77□□□□□ -2.53
YPT35P38815 tY(GUA)QtY(GUA)Q 84 nt-0.78□□□□□ -2.53
YPT35P38815 YKL096C-BYKL096C-B 150 nt-0.81□□□□□ -2.54
YPT35P38815 YBR223W-AYBR223W-A 120 nt-0.84□□□□□ -2.54
YPT35P38815 snR40snR40 97 nt-0.89□□□□□ -2.55
YPT35P38815 snR75snR75 89 nt-1.06□□□□□ -2.58
YPT35P38815 snR87snR87 109 nt-1.12□□□□□ -2.59
YPT35P38815 snR58snR58 96 nt-1.15□□□□□ -2.59
YPT35P38815 tC(GCA)QtC(GCA)Q 76 nt-1.2□□□□□ -2.6
YPT35P38815 YBR126W-BYBR126W-B 144 nt-1.27□□□□□ -2.61
YPT35P38815 YOL166W-AYOL166W-A 156 nt-1.54□□□□□ -2.66
YPT35P38815 YDR543CYDR543C 300 nt-1.93□□□□□ -2.72
YPT35P38815 YJL136W-AYJL136W-A 84 nt-2.02□□□□□ -2.73
YPT35P38815 YJR162CYJR162C 351 nt-2.46□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 5.2 ms