Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 snR62snR62 100 nt-2.08□□□□□ -2.74
SSH1P38353 YLR294CYLR294C 330 nt-2.1□□□□□ -2.75
SSH1P38353 YNL170WYNL170W 396 nt-2.11□□□□□ -2.75
SSH1P38353 snR85snR85 171 nt-2.13□□□□□ -2.75
SSH1P38353 YDL159W-AYDL159W-A 132 nt-2.16□□□□□ -2.76
SSH1P38353 YGR122C-AYGR122C-A 129 nt-2.17□□□□□ -2.76
SSH1P38353 YOR225WYOR225W 330 nt-2.17□□□□□ -2.76
SSH1P38353 YOL166W-AYOL166W-A 156 nt-2.18□□□□□ -2.76
SSH1P38353 YDR543CYDR543C 300 nt-2.23□□□□□ -2.77
SSH1P38353 snR64snR64 101 nt-2.24□□□□□ -2.77
SSH1P38353 ATP8Q0080 147 nt-2.38□□□□□ -2.79
SSH1P38353 YKL096C-BYKL096C-B 150 nt-2.56□□□□□ -2.82
SSH1P38353 Q0143Q0143 153 nt-2.57□□□□□ -2.82
SSH1P38353 YMR326CYMR326C 309 nt-2.57□□□□□ -2.82
SSH1P38353 YDR524C-AYDR524C-A 120 nt-2.6□□□□□ -2.83
SSH1P38353 YHR217CYHR217C 462 nt-2.61□□□□□ -2.83
SSH1P38353 YLL066W-BYLL066W-B 171 nt-2.62□□□□□ -2.83
SSH1P38353 snR53snR53 91 nt-2.71□□□□□ -2.84
SSH1P38353 Q0092Q0092 141 nt-2.77□□□□□ -2.85
SSH1P38353 snR87snR87 109 nt-2.78□□□□□ -2.85
SSH1P38353 YLR149C-AYLR149C-A 87 nt-2.82□□□□□ -2.86
SSH1P38353 snR58snR58 96 nt-2.84□□□□□ -2.86
SSH1P38353 YBL109WYBL109W 336 nt-2.89□□□□□ -2.87
SSH1P38353 snR40snR40 97 nt-3.02□□□□□ -2.89
SSH1P38353 YDL247W-AYDL247W-A 75 nt-3.15□□□□□ -2.91
SSH1P38353 tC(GCA)QtC(GCA)Q 76 nt-3.19□□□□□ -2.92
SSH1P38353 YJR162CYJR162C 351 nt-3.32□□□□□ -2.94
SSH1P38353 snR75snR75 89 nt-3.97□□□□□ -3.04
SSH1P38353 YJL136W-AYJL136W-A 84 nt-4.04□□□□□ -3.06
Retrieved 29 of 7,029 protein–RNA pairs in 44.7 ms