Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 snR33snR33 183 nt-0.72□□□□□ -2.52
MSH2P25847 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
MSH2P25847 YGR122C-AYGR122C-A 129 nt-0.92□□□□□ -2.56
MSH2P25847 YDL159W-AYDL159W-A 132 nt-0.94□□□□□ -2.56
MSH2P25847 snR53snR53 91 nt-0.95□□□□□ -2.56
MSH2P25847 snR77snR77 88 nt-0.97□□□□□ -2.56
MSH2P25847 YDL114W-AYDL114W-A 114 nt-0.99□□□□□ -2.57
MSH2P25847 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
MSH2P25847 CDC65tQ(CUG)M 72 nt-1.02□□□□□ -2.57
MSH2P25847 tV(UAC)QtV(UAC)Q 76 nt-1.09□□□□□ -2.58
MSH2P25847 YMR315W-AYMR315W-A 108 nt-1.16□□□□□ -2.6
MSH2P25847 YLR149C-AYLR149C-A 87 nt-1.32□□□□□ -2.62
MSH2P25847 tY(GUA)QtY(GUA)Q 84 nt-1.37□□□□□ -2.63
MSH2P25847 snR6snR6 112 nt-1.43□□□□□ -2.64
MSH2P25847 RPL41BYDL133C-A 78 nt-1.47□□□□□ -2.64
MSH2P25847 YOR335W-AYOR335W-A 81 nt-1.47□□□□□ -2.64
MSH2P25847 YOR309CYOR309C 381 nt-1.51□□□□□ -2.65
MSH2P25847 snR73snR73 106 nt-1.6□□□□□ -2.67
MSH2P25847 YKL096C-BYKL096C-B 150 nt-1.63□□□□□ -2.67
MSH2P25847 YBR126W-BYBR126W-B 144 nt-1.67□□□□□ -2.68
MSH2P25847 snR40snR40 97 nt-1.97□□□□□ -2.72
MSH2P25847 YDR543CYDR543C 300 nt-2.01□□□□□ -2.73
MSH2P25847 YOL166W-AYOL166W-A 156 nt-2.06□□□□□ -2.74
MSH2P25847 snR58snR58 96 nt-2.2□□□□□ -2.76
MSH2P25847 snR75snR75 89 nt-2.2□□□□□ -2.76
MSH2P25847 snR87snR87 109 nt-2.34□□□□□ -2.78
MSH2P25847 tC(GCA)QtC(GCA)Q 76 nt-2.42□□□□□ -2.8
MSH2P25847 YJR162CYJR162C 351 nt-2.85□□□□□ -2.87
MSH2P25847 YJL136W-AYJL136W-A 84 nt-3.83□□□□□ -3.02
Retrieved 29 of 7,029 protein–RNA pairs in 6.8 ms