Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 tA(UGC)QtA(UGC)Q 76 nt0.15□□□□□ -2.39
PUF4P25339 snR40snR40 97 nt0.14□□□□□ -2.39
PUF4P25339 YJL113WYJL113W 4647 nt0.09□□□□□ -2.4
PUF4P25339 snR161snR161 161 nt0.01□□□□□ -2.41
PUF4P25339 snR6snR6 112 nt-0.18□□□□□ -2.44
PUF4P25339 YOR335W-AYOR335W-A 81 nt-0.2□□□□□ -2.44
PUF4P25339 YNR077CYNR077C 255 nt-0.21□□□□□ -2.44
PUF4P25339 URB1YKL014C 5295 nt-0.3□□□□□ -2.46 RIP-Chip
PUF4P25339 CDC65tQ(CUG)M 72 nt-0.3□□□□□ -2.46
PUF4P25339 YHL009W-BYHL009W-B 5409 nt-0.33□□□□□ -2.46
PUF4P25339 RPL41BYDL133C-A 78 nt-0.33□□□□□ -2.46
PUF4P25339 snR73snR73 106 nt-0.38□□□□□ -2.47
PUF4P25339 snR33snR33 183 nt-0.42□□□□□ -2.48
PUF4P25339 YMR315W-AYMR315W-A 108 nt-0.43□□□□□ -2.48
PUF4P25339 tP(UGG)QtP(UGG)Q 72 nt-0.45□□□□□ -2.48
PUF4P25339 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
PUF4P25339 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
PUF4P25339 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
PUF4P25339 tC(GCA)QtC(GCA)Q 76 nt-0.61□□□□□ -2.51
PUF4P25339 YOR309CYOR309C 381 nt-0.67□□□□□ -2.52 RIP-Chip
PUF4P25339 YBR223W-AYBR223W-A 120 nt-0.67□□□□□ -2.52
PUF4P25339 snR58snR58 96 nt-0.69□□□□□ -2.52
PUF4P25339 tY(GUA)QtY(GUA)Q 84 nt-0.78□□□□□ -2.53
PUF4P25339 snR87snR87 109 nt-1.01□□□□□ -2.57
PUF4P25339 YBR126W-BYBR126W-B 144 nt-1.27□□□□□ -2.61
PUF4P25339 YOL166W-AYOL166W-A 156 nt-1.36□□□□□ -2.63
PUF4P25339 YDR543CYDR543C 300 nt-1.53□□□□□ -2.65
PUF4P25339 YJL136W-AYJL136W-A 84 nt-2.04□□□□□ -2.74
PUF4P25339 YJR162CYJR162C 351 nt-2.3□□□□□ -2.78
Retrieved 29 of 7,029 protein–RNA pairs in 30.6 ms