Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 YJL113WYJL113W 4647 nt-0.41□□□□□ -2.48
PRP28P23394 YKL096C-BYKL096C-B 150 nt-0.5□□□□□ -2.49
PRP28P23394 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
PRP28P23394 URB1YKL014C 5295 nt-0.56□□□□□ -2.5
PRP28P23394 snR33snR33 183 nt-0.68□□□□□ -2.52
PRP28P23394 CDC65tQ(CUG)M 72 nt-0.7□□□□□ -2.52
PRP28P23394 tT(UGU)G1tT(UGU)G1 72 nt-0.78□□□□□ -2.53
PRP28P23394 tT(UGU)G2tT(UGU)G2 72 nt-0.78□□□□□ -2.53
PRP28P23394 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
PRP28P23394 tP(UGG)QtP(UGG)Q 72 nt-0.83□□□□□ -2.54
PRP28P23394 YMR315W-AYMR315W-A 108 nt-0.83□□□□□ -2.54
PRP28P23394 snR75snR75 89 nt-0.85□□□□□ -2.55
PRP28P23394 snR6snR6 112 nt-0.86□□□□□ -2.55
PRP28P23394 YOR335W-AYOR335W-A 81 nt-0.87□□□□□ -2.55
PRP28P23394 RPL41BYDL133C-A 78 nt-0.94□□□□□ -2.56
PRP28P23394 snR40snR40 97 nt-0.95□□□□□ -2.56
PRP28P23394 snR73snR73 106 nt-1.05□□□□□ -2.58
PRP28P23394 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
PRP28P23394 YOR309CYOR309C 381 nt-1.15□□□□□ -2.59
PRP28P23394 YNR077CYNR077C 255 nt-1.24□□□□□ -2.61
PRP28P23394 tY(GUA)QtY(GUA)Q 84 nt-1.28□□□□□ -2.61
PRP28P23394 snR58snR58 96 nt-1.53□□□□□ -2.65
PRP28P23394 tC(GCA)QtC(GCA)Q 76 nt-1.58□□□□□ -2.66
PRP28P23394 snR87snR87 109 nt-1.77□□□□□ -2.69
PRP28P23394 YBR126W-BYBR126W-B 144 nt-1.94□□□□□ -2.72
PRP28P23394 YDR543CYDR543C 300 nt-2.48□□□□□ -2.81
PRP28P23394 YOL166W-AYOL166W-A 156 nt-2.67□□□□□ -2.84
PRP28P23394 YJL136W-AYJL136W-A 84 nt-3.44□□□□□ -2.96
PRP28P23394 YJR162CYJR162C 351 nt-3.52□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 2.8 ms