Protein–RNA interactions for Protein: P0C2I8

TY1A-LR4, Transposon Ty1-LR4 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR4P0C2I8 tA(UGC)QtA(UGC)Q 76 nt0.08□□□□□ -2.4
TY1A-LR4P0C2I8 snR161snR161 161 nt-0.06□□□□□ -2.42
TY1A-LR4P0C2I8 YJL113WYJL113W 4647 nt-0.17□□□□□ -2.44
TY1A-LR4P0C2I8 snR40snR40 97 nt-0.24□□□□□ -2.45
TY1A-LR4P0C2I8 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
TY1A-LR4P0C2I8 RPL41BYDL133C-A 78 nt-0.46□□□□□ -2.48
TY1A-LR4P0C2I8 YHL009W-BYHL009W-B 5409 nt-0.46□□□□□ -2.48
TY1A-LR4P0C2I8 snR33snR33 183 nt-0.47□□□□□ -2.48
TY1A-LR4P0C2I8 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TY1A-LR4P0C2I8 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TY1A-LR4P0C2I8 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TY1A-LR4P0C2I8 CDC65tQ(CUG)M 72 nt-0.56□□□□□ -2.5
TY1A-LR4P0C2I8 snR6snR6 112 nt-0.58□□□□□ -2.5
TY1A-LR4P0C2I8 YOR335W-AYOR335W-A 81 nt-0.6□□□□□ -2.51
TY1A-LR4P0C2I8 YMR315W-AYMR315W-A 108 nt-0.66□□□□□ -2.52
TY1A-LR4P0C2I8 tP(UGG)QtP(UGG)Q 72 nt-0.67□□□□□ -2.52
TY1A-LR4P0C2I8 YBR223W-AYBR223W-A 120 nt-0.74□□□□□ -2.53
TY1A-LR4P0C2I8 snR73snR73 106 nt-0.79□□□□□ -2.54
TY1A-LR4P0C2I8 tY(GUA)QtY(GUA)Q 84 nt-0.9□□□□□ -2.55
TY1A-LR4P0C2I8 YNR077CYNR077C 255 nt-0.91□□□□□ -2.56
TY1A-LR4P0C2I8 snR58snR58 96 nt-0.96□□□□□ -2.56
TY1A-LR4P0C2I8 tC(GCA)QtC(GCA)Q 76 nt-0.98□□□□□ -2.57
TY1A-LR4P0C2I8 YOR309CYOR309C 381 nt-1.06□□□□□ -2.58
TY1A-LR4P0C2I8 YBR126W-BYBR126W-B 144 nt-1.26□□□□□ -2.61
TY1A-LR4P0C2I8 snR87snR87 109 nt-1.54□□□□□ -2.66
TY1A-LR4P0C2I8 YDR543CYDR543C 300 nt-1.69□□□□□ -2.68
TY1A-LR4P0C2I8 YOL166W-AYOL166W-A 156 nt-1.93□□□□□ -2.72
TY1A-LR4P0C2I8 YJR162CYJR162C 351 nt-2.28□□□□□ -2.77
TY1A-LR4P0C2I8 YJL136W-AYJL136W-A 84 nt-2.46□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 35.3 ms