Protein–RNA interactions for Protein: P08432

SPE1, Ornithine decarboxylase, yeastyeast

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPE1P08432 snR77snR77 88 nt-0.02□□□□□ -2.41
SPE1P08432 snR161snR161 161 nt-0.13□□□□□ -2.43
SPE1P08432 YJL113WYJL113W 4647 nt-0.22□□□□□ -2.44
SPE1P08432 snR40snR40 97 nt-0.4□□□□□ -2.47
SPE1P08432 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
SPE1P08432 CDC65tQ(CUG)M 72 nt-0.55□□□□□ -2.5
SPE1P08432 snR6snR6 112 nt-0.57□□□□□ -2.5
SPE1P08432 URB1YKL014C 5295 nt-0.6□□□□□ -2.51
SPE1P08432 RPL41BYDL133C-A 78 nt-0.6□□□□□ -2.51
SPE1P08432 YOR335W-AYOR335W-A 81 nt-0.6□□□□□ -2.51
SPE1P08432 snR33snR33 183 nt-0.62□□□□□ -2.51
SPE1P08432 YMR315W-AYMR315W-A 108 nt-0.67□□□□□ -2.52
SPE1P08432 tT(UGU)G1tT(UGU)G1 72 nt-0.69□□□□□ -2.52
SPE1P08432 tT(UGU)G2tT(UGU)G2 72 nt-0.69□□□□□ -2.52
SPE1P08432 tT(UGU)PtT(UGU)P 72 nt-0.69□□□□□ -2.52
SPE1P08432 tP(UGG)QtP(UGG)Q 72 nt-0.77□□□□□ -2.53
SPE1P08432 snR73snR73 106 nt-0.78□□□□□ -2.53
SPE1P08432 YNR077CYNR077C 255 nt-0.93□□□□□ -2.56
SPE1P08432 YOR309CYOR309C 381 nt-0.99□□□□□ -2.57
SPE1P08432 YBR223W-AYBR223W-A 120 nt-1□□□□□ -2.57
SPE1P08432 snR58snR58 96 nt-1.08□□□□□ -2.58
SPE1P08432 tC(GCA)QtC(GCA)Q 76 nt-1.11□□□□□ -2.59
SPE1P08432 tY(GUA)QtY(GUA)Q 84 nt-1.18□□□□□ -2.6
SPE1P08432 snR87snR87 109 nt-1.48□□□□□ -2.65
SPE1P08432 YBR126W-BYBR126W-B 144 nt-1.71□□□□□ -2.68
SPE1P08432 YDR543CYDR543C 300 nt-2.26□□□□□ -2.77
SPE1P08432 YOL166W-AYOL166W-A 156 nt-2.4□□□□□ -2.79
SPE1P08432 YJL136W-AYJL136W-A 84 nt-3.17□□□□□ -2.92
SPE1P08432 YJR162CYJR162C 351 nt-3.22□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 71.1 ms