Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim43aQ3TL54 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Gm12441-201ENSMUST00000121806 588 ntBASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim43aQ3TL54 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim43aQ3TL54 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43aQ3TL54 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Gm44549-201ENSMUST00000208351 577 ntBASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim43aQ3TL54 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Flg-201ENSMUST00000050758 1488 ntBASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gm6211-202ENSMUST00000167849 925 ntBASIC18.21■□□□□ 0.51
Trim43aQ3TL54 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gm4968-201ENSMUST00000071458 858 ntBASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43aQ3TL54 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trim43aQ3TL54 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43aQ3TL54 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms