Protein–RNA interactions for Protein: Q07824

TPO1, Polyamine transporter 1, yeastyeast

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPO1Q07824 snR47snR47 99 nt1.18□□□□□ -2.22
TPO1Q07824 YPL060C-AYPL060C-A 3315 nt1.16□□□□□ -2.22
TPO1Q07824 YLR299C-AYLR299C-A 93 nt1.15□□□□□ -2.23
TPO1Q07824 ORC3YLL004W 1851 nt1.14□□□□□ -2.23
TPO1Q07824 YDL159C-BYDL159C-B 177 nt1.12□□□□□ -2.23
TPO1Q07824 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
TPO1Q07824 RDS3YPR094W 324 nt1.11□□□□□ -2.23
TPO1Q07824 NIP1YMR309C 2439 nt1.11□□□□□ -2.23
TPO1Q07824 NST1YNL091W 3723 nt1.08□□□□□ -2.24
TPO1Q07824 YJL077W-AYJL077W-A 87 nt1.07□□□□□ -2.24
TPO1Q07824 RKR1YMR247C 4689 nt1.07□□□□□ -2.24
TPO1Q07824 BUL2YML111W 2763 nt1.07□□□□□ -2.24
TPO1Q07824 BEM2YER155C 6504 nt1.04□□□□□ -2.24
TPO1Q07824 PAU12YGR294W 363 nt1.04□□□□□ -2.24
TPO1Q07824 BUD3YCL014W 4911 nt1.03□□□□□ -2.24
TPO1Q07824 YOR192C-BYOR192C-B 5313 nt1.01□□□□□ -2.25
TPO1Q07824 snR64snR64 101 nt1□□□□□ -2.25
TPO1Q07824 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
TPO1Q07824 YML054C-AYML054C-A 159 nt0.99□□□□□ -2.25
TPO1Q07824 snR53snR53 91 nt0.99□□□□□ -2.25
TPO1Q07824 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
TPO1Q07824 tQ(UUG)QtQ(UUG)Q 76 nt0.98□□□□□ -2.25
TPO1Q07824 YHR180C-BYHR180C-B 105 nt0.98□□□□□ -2.25
TPO1Q07824 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
TPO1Q07824 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
TPO1Q07824 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
TPO1Q07824 MYO1YHR023W 5787 nt0.94□□□□□ -2.26
TPO1Q07824 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
TPO1Q07824 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
TPO1Q07824 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
TPO1Q07824 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
TPO1Q07824 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
TPO1Q07824 YKL225WYKL225W 348 nt0.94□□□□□ -2.26
TPO1Q07824 YBR109W-AYBR109W-A 225 nt0.93□□□□□ -2.26
TPO1Q07824 PAU24YBR301W 363 nt0.93□□□□□ -2.26
TPO1Q07824 RPL41AYDL184C 78 nt0.91□□□□□ -2.26
TPO1Q07824 YDR371C-AYDR371C-A 105 nt0.91□□□□□ -2.26
TPO1Q07824 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
TPO1Q07824 YNL054W-BYNL054W-B 5250 nt0.91□□□□□ -2.26
TPO1Q07824 PET111YMR257C 2403 nt0.89□□□□□ -2.27
TPO1Q07824 YBR296C-AYBR296C-A 120 nt0.88□□□□□ -2.27
TPO1Q07824 YER090C-AYER090C-A 90 nt0.86□□□□□ -2.27
TPO1Q07824 snR50snR50 90 nt0.86□□□□□ -2.27
TPO1Q07824 LTE1YAL024C 4308 nt0.85□□□□□ -2.27
TPO1Q07824 snR38snR38 95 nt0.83□□□□□ -2.28
TPO1Q07824 UTP20YBL004W 7482 nt0.8□□□□□ -2.28
TPO1Q07824 tF(GAA)BtF(GAA)B 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)FtF(GAA)F 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)GtF(GAA)G 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)H1tF(GAA)H1 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)H2tF(GAA)H2 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)MtF(GAA)M 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)P1tF(GAA)P1 73 nt0.79□□□□□ -2.28
TPO1Q07824 tF(GAA)P2tF(GAA)P2 73 nt0.79□□□□□ -2.28
TPO1Q07824 AI1Q0050 2505 nt0.78□□□□□ -2.28
TPO1Q07824 YBL100W-BYBL100W-B 5313 nt0.77□□□□□ -2.29
TPO1Q07824 YMR160WYMR160W 2451 nt0.74□□□□□ -2.29
TPO1Q07824 MLP1YKR095W 5628 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
TPO1Q07824 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
TPO1Q07824 snR67snR67 82 nt0.72□□□□□ -2.29
TPO1Q07824 SKI7YOR076C 2244 nt0.7□□□□□ -2.3
TPO1Q07824 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
TPO1Q07824 YDL159W-AYDL159W-A 132 nt0.68□□□□□ -2.3
TPO1Q07824 YOL014WYOL014W 375 nt0.62□□□□□ -2.31
TPO1Q07824 YKL145W-AYKL145W-A 93 nt0.61□□□□□ -2.31
TPO1Q07824 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
TPO1Q07824 YOR186C-AYOR186C-A 210 nt0.61□□□□□ -2.31
TPO1Q07824 YGR122C-AYGR122C-A 129 nt0.6□□□□□ -2.31
TPO1Q07824 YLR149C-AYLR149C-A 87 nt0.59□□□□□ -2.31
TPO1Q07824 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
TPO1Q07824 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
TPO1Q07824 MLP2YIL149C 5040 nt0.53□□□□□ -2.32
TPO1Q07824 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
TPO1Q07824 YML100W-AYML100W-A 174 nt0.48□□□□□ -2.33
TPO1Q07824 YKL096C-BYKL096C-B 150 nt0.47□□□□□ -2.33
TPO1Q07824 SOV1YMR066W 2697 nt0.44□□□□□ -2.34
TPO1Q07824 YKL106C-AYKL106C-A 120 nt0.44□□□□□ -2.34
TPO1Q07824 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
TPO1Q07824 snR128snR128 126 nt0.33□□□□□ -2.36
TPO1Q07824 YOL013W-AYOL013W-A 192 nt0.32□□□□□ -2.36
TPO1Q07824 THO2YNL139C 4794 nt0.32□□□□□ -2.36
TPO1Q07824 YDL114W-AYDL114W-A 114 nt0.3□□□□□ -2.36
TPO1Q07824 YER078W-AYER078W-A 165 nt0.27□□□□□ -2.37
TPO1Q07824 YOR376W-AYOR376W-A 156 nt0.26□□□□□ -2.37
TPO1Q07824 PAU9YBL108C-A 129 nt0.25□□□□□ -2.37
TPO1Q07824 snR75snR75 89 nt0.24□□□□□ -2.37
TPO1Q07824 tV(UAC)QtV(UAC)Q 76 nt0.21□□□□□ -2.38
TPO1Q07824 YOR316C-AYOR316C-A 210 nt0.17□□□□□ -2.38
TPO1Q07824 SBH2YER019C-A 267 nt0.11□□□□□ -2.39
TPO1Q07824 snR77snR77 88 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 78 ms