Protein–RNA interactions for Protein: Q06549

CDD1, Cytidine deaminase, yeastyeast

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDD1Q06549 tM(CAU)Q1tM(CAU)Q1 76 nt0.2□□□□□ -2.38
CDD1Q06549 YBL053WYBL053W 375 nt0.2□□□□□ -2.38
CDD1Q06549 YOR329W-AYOR329W-A 210 nt0.2□□□□□ -2.38
CDD1Q06549 YDR210WYDR210W 228 nt0.19□□□□□ -2.38
CDD1Q06549 tL(UAA)QtL(UAA)Q 85 nt0.19□□□□□ -2.38
CDD1Q06549 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
CDD1Q06549 snR48snR48 113 nt0.19□□□□□ -2.38
CDD1Q06549 YNL198CYNL198C 303 nt0.18□□□□□ -2.38
CDD1Q06549 YBR099CYBR099C 384 nt0.15□□□□□ -2.39
CDD1Q06549 CSE1YGL238W 2883 nt0.12□□□□□ -2.39
CDD1Q06549 YDL007C-AYDL007C-A 258 nt0.12□□□□□ -2.39
CDD1Q06549 YLR466C-BYLR466C-B 117 nt0.12□□□□□ -2.39
CDD1Q06549 tM(CAU)Q2tM(CAU)Q2 78 nt0.11□□□□□ -2.39
CDD1Q06549 YOR102WYOR102W 351 nt0.11□□□□□ -2.39
CDD1Q06549 EST1YLR233C 2100 nt0.09□□□□□ -2.4
CDD1Q06549 YOR186C-AYOR186C-A 210 nt0.09□□□□□ -2.4
CDD1Q06549 YGR146C-AYGR146C-A 162 nt0.08□□□□□ -2.4
CDD1Q06549 YHL015W-AYHL015W-A 84 nt0.08□□□□□ -2.4
CDD1Q06549 snR45snR45 172 nt0.08□□□□□ -2.4
CDD1Q06549 YGR151CYGR151C 336 nt0.06□□□□□ -2.4
CDD1Q06549 YNL067W-BYNL067W-B 141 nt0.05□□□□□ -2.4
CDD1Q06549 YNL337WYNL337W 255 nt0.04□□□□□ -2.4
CDD1Q06549 snR69snR69 101 nt0.03□□□□□ -2.4
CDD1Q06549 YNL338WYNL338W 159 nt0.03□□□□□ -2.4
CDD1Q06549 YGL007C-AYGL007C-A 87 nt0.02□□□□□ -2.41
CDD1Q06549 YGR164WYGR164W 336 nt0.02□□□□□ -2.41
CDD1Q06549 PMP2YEL017C-A 132 nt0.01□□□□□ -2.41
CDD1Q06549 YOR225WYOR225W 330 nt-0.02□□□□□ -2.41
CDD1Q06549 YIL071W-AYIL071W-A 477 nt-0.03□□□□□ -2.41
CDD1Q06549 YNL205CYNL205C 423 nt-0.03□□□□□ -2.41
CDD1Q06549 Q0032Q0032 291 nt-0.04□□□□□ -2.42
CDD1Q06549 YJL077W-AYJL077W-A 87 nt-0.04□□□□□ -2.42
CDD1Q06549 snR128snR128 126 nt-0.05□□□□□ -2.42
CDD1Q06549 SEC10YLR166C 2616 nt-0.05□□□□□ -2.42
CDD1Q06549 TFB5YDR079C-A 219 nt-0.06□□□□□ -2.42
CDD1Q06549 RDS3YPR094W 324 nt-0.07□□□□□ -2.42
CDD1Q06549 tD(GUC)QtD(GUC)Q 75 nt-0.08□□□□□ -2.42
CDD1Q06549 tQ(UUG)QtQ(UUG)Q 76 nt-0.08□□□□□ -2.42
CDD1Q06549 YML100W-AYML100W-A 174 nt-0.09□□□□□ -2.42
CDD1Q06549 YBR178WYBR178W 375 nt-0.09□□□□□ -2.42
CDD1Q06549 YER090C-AYER090C-A 90 nt-0.1□□□□□ -2.43
CDD1Q06549 snR50snR50 90 nt-0.1□□□□□ -2.43
CDD1Q06549 YNL266WYNL266W 420 nt-0.11□□□□□ -2.43
CDD1Q06549 SOM1YEL059C-A 225 nt-0.12□□□□□ -2.43
CDD1Q06549 YLR294CYLR294C 330 nt-0.14□□□□□ -2.43
CDD1Q06549 YCR095W-AYCR095W-A 159 nt-0.15□□□□□ -2.43
CDD1Q06549 YLR286W-AYLR286W-A 135 nt-0.15□□□□□ -2.43
CDD1Q06549 YCL001W-BYCL001W-B 255 nt-0.15□□□□□ -2.43
CDD1Q06549 YDL159C-BYDL159C-B 177 nt-0.17□□□□□ -2.44
CDD1Q06549 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
CDD1Q06549 YBR196C-AYBR196C-A 150 nt-0.2□□□□□ -2.44
CDD1Q06549 SBH2YER019C-A 267 nt-0.24□□□□□ -2.45
CDD1Q06549 YLR299C-AYLR299C-A 93 nt-0.25□□□□□ -2.45
CDD1Q06549 tA(UGC)QtA(UGC)Q 76 nt-0.26□□□□□ -2.45
CDD1Q06549 SKI7YOR076C 2244 nt-0.27□□□□□ -2.45
CDD1Q06549 snR67snR67 82 nt-0.28□□□□□ -2.45
CDD1Q06549 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
CDD1Q06549 YML054C-AYML054C-A 159 nt-0.31□□□□□ -2.46
CDD1Q06549 YBL071C-BYBL071C-B 99 nt-0.34□□□□□ -2.46
CDD1Q06549 YNL170WYNL170W 396 nt-0.35□□□□□ -2.47
CDD1Q06549 YOL083C-AYOL083C-A 141 nt-0.37□□□□□ -2.47
CDD1Q06549 snR81snR81 201 nt-0.39□□□□□ -2.47
CDD1Q06549 ATP8Q0080 147 nt-0.39□□□□□ -2.47
CDD1Q06549 YHR180C-BYHR180C-B 105 nt-0.41□□□□□ -2.48
CDD1Q06549 YAL037C-AYAL037C-A 93 nt-0.41□□□□□ -2.48
CDD1Q06549 YNL103W-AYNL103W-A 90 nt-0.43□□□□□ -2.48
CDD1Q06549 YOL164W-AYOL164W-A 183 nt-0.44□□□□□ -2.48
CDD1Q06549 YBR109W-AYBR109W-A 225 nt-0.45□□□□□ -2.48
CDD1Q06549 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
CDD1Q06549 snR38snR38 95 nt-0.48□□□□□ -2.49
CDD1Q06549 YHL009W-BYHL009W-B 5409 nt-0.5□□□□□ -2.49
CDD1Q06549 snR61snR61 90 nt-0.52□□□□□ -2.49
CDD1Q06549 Q0092Q0092 141 nt-0.52□□□□□ -2.49
CDD1Q06549 YGL041C-BYGL041C-B 183 nt-0.52□□□□□ -2.49
CDD1Q06549 snR161snR161 161 nt-0.53□□□□□ -2.49
CDD1Q06549 snR47snR47 99 nt-0.53□□□□□ -2.49
CDD1Q06549 YOR376W-AYOR376W-A 156 nt-0.54□□□□□ -2.5
CDD1Q06549 YBR296C-AYBR296C-A 120 nt-0.55□□□□□ -2.5
CDD1Q06549 RPL41AYDL184C 78 nt-0.56□□□□□ -2.5
CDD1Q06549 YGR240C-AYGR240C-A 201 nt-0.56□□□□□ -2.5
CDD1Q06549 YNR077CYNR077C 255 nt-0.56□□□□□ -2.5
CDD1Q06549 snR33snR33 183 nt-0.57□□□□□ -2.5
CDD1Q06549 tS(GCU)Q1tS(GCU)Q1 86 nt-0.59□□□□□ -2.5
CDD1Q06549 Q0143Q0143 153 nt-0.62□□□□□ -2.51
CDD1Q06549 tT(UGU)G1tT(UGU)G1 72 nt-0.62□□□□□ -2.51
CDD1Q06549 tT(UGU)G2tT(UGU)G2 72 nt-0.62□□□□□ -2.51
CDD1Q06549 tT(UGU)PtT(UGU)P 72 nt-0.62□□□□□ -2.51
CDD1Q06549 YBL100W-CYBL100W-C 120 nt-0.64□□□□□ -2.51
CDD1Q06549 YKL106C-AYKL106C-A 120 nt-0.65□□□□□ -2.51
CDD1Q06549 snR77snR77 88 nt-0.67□□□□□ -2.52
CDD1Q06549 YKL225WYKL225W 348 nt-0.7□□□□□ -2.52
CDD1Q06549 YOR316C-AYOR316C-A 210 nt-0.7□□□□□ -2.52
CDD1Q06549 snR62snR62 100 nt-0.71□□□□□ -2.52
CDD1Q06549 YDR034C-AYDR034C-A 177 nt-0.72□□□□□ -2.52
CDD1Q06549 tP(UGG)QtP(UGG)Q 72 nt-0.73□□□□□ -2.53
CDD1Q06549 CDC65tQ(CUG)M 72 nt-0.75□□□□□ -2.53
CDD1Q06549 YMR326CYMR326C 309 nt-0.82□□□□□ -2.54
CDD1Q06549 YHR217CYHR217C 462 nt-0.83□□□□□ -2.54
CDD1Q06549 snR85snR85 171 nt-0.84□□□□□ -2.54
CDD1Q06549 YBL109WYBL109W 336 nt-0.86□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms