Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 snR48snR48 113 nt0.1□□□□□ -2.39
VTI1Q04338 tM(CAU)Q1tM(CAU)Q1 76 nt0.09□□□□□ -2.4
VTI1Q04338 YOR102WYOR102W 351 nt0.09□□□□□ -2.4
VTI1Q04338 tF(GAA)BtF(GAA)B 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)FtF(GAA)F 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)GtF(GAA)G 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)H1tF(GAA)H1 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)H2tF(GAA)H2 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)MtF(GAA)M 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)P1tF(GAA)P1 73 nt0.08□□□□□ -2.4
VTI1Q04338 tF(GAA)P2tF(GAA)P2 73 nt0.08□□□□□ -2.4
VTI1Q04338 YNL338WYNL338W 159 nt0.08□□□□□ -2.4
VTI1Q04338 YOR186C-AYOR186C-A 210 nt0.07□□□□□ -2.4
VTI1Q04338 YDL007C-AYDL007C-A 258 nt0.05□□□□□ -2.4
VTI1Q04338 YGR151CYGR151C 336 nt0.05□□□□□ -2.4
VTI1Q04338 YNL067W-BYNL067W-B 141 nt0.05□□□□□ -2.4
VTI1Q04338 snR69snR69 101 nt0.01□□□□□ -2.41
VTI1Q04338 YGR146C-AYGR146C-A 162 nt0.01□□□□□ -2.41
VTI1Q04338 YGR164WYGR164W 336 nt0.01□□□□□ -2.41
VTI1Q04338 snR128snR128 126 nt-0.01□□□□□ -2.41
VTI1Q04338 YPL060C-AYPL060C-A 3315 nt-0.02□□□□□ -2.41
VTI1Q04338 tQ(UUG)QtQ(UUG)Q 76 nt-0.03□□□□□ -2.41
VTI1Q04338 PMP2YEL017C-A 132 nt-0.04□□□□□ -2.42
VTI1Q04338 YOL014WYOL014W 375 nt-0.04□□□□□ -2.42
VTI1Q04338 YBR178WYBR178W 375 nt-0.06□□□□□ -2.42
VTI1Q04338 snR50snR50 90 nt-0.07□□□□□ -2.42
VTI1Q04338 YIL071W-AYIL071W-A 477 nt-0.08□□□□□ -2.42
VTI1Q04338 YNL337WYNL337W 255 nt-0.08□□□□□ -2.42
VTI1Q04338 SEC10YLR166C 2616 nt-0.1□□□□□ -2.42
VTI1Q04338 YNL205CYNL205C 423 nt-0.11□□□□□ -2.43
VTI1Q04338 tD(GUC)QtD(GUC)Q 75 nt-0.12□□□□□ -2.43
VTI1Q04338 YER078W-AYER078W-A 165 nt-0.12□□□□□ -2.43
VTI1Q04338 RDS3YPR094W 324 nt-0.12□□□□□ -2.43
VTI1Q04338 YJL077W-AYJL077W-A 87 nt-0.13□□□□□ -2.43
VTI1Q04338 YGL007C-AYGL007C-A 87 nt-0.14□□□□□ -2.43
VTI1Q04338 YNL266WYNL266W 420 nt-0.14□□□□□ -2.43
VTI1Q04338 SOM1YEL059C-A 225 nt-0.16□□□□□ -2.44
VTI1Q04338 YER090C-AYER090C-A 90 nt-0.17□□□□□ -2.44
VTI1Q04338 YLR286W-AYLR286W-A 135 nt-0.17□□□□□ -2.44
VTI1Q04338 snR45snR45 172 nt-0.17□□□□□ -2.44
VTI1Q04338 YML100W-AYML100W-A 174 nt-0.18□□□□□ -2.44
VTI1Q04338 YCL001W-BYCL001W-B 255 nt-0.18□□□□□ -2.44
VTI1Q04338 YOR225WYOR225W 330 nt-0.19□□□□□ -2.44
VTI1Q04338 YDL159C-BYDL159C-B 177 nt-0.21□□□□□ -2.44
VTI1Q04338 Q0032Q0032 291 nt-0.23□□□□□ -2.45
VTI1Q04338 RPM2YML091C 3609 nt-0.24□□□□□ -2.45
VTI1Q04338 YBR196C-AYBR196C-A 150 nt-0.24□□□□□ -2.45
VTI1Q04338 SBH2YER019C-A 267 nt-0.25□□□□□ -2.45
VTI1Q04338 YCR095W-AYCR095W-A 159 nt-0.26□□□□□ -2.45
VTI1Q04338 YLR294CYLR294C 330 nt-0.26□□□□□ -2.45
VTI1Q04338 PAU9YBL108C-A 129 nt-0.26□□□□□ -2.45
VTI1Q04338 YLR299C-AYLR299C-A 93 nt-0.29□□□□□ -2.46
VTI1Q04338 tA(UGC)QtA(UGC)Q 76 nt-0.34□□□□□ -2.46
VTI1Q04338 snR67snR67 82 nt-0.35□□□□□ -2.47
VTI1Q04338 SKI7YOR076C 2244 nt-0.36□□□□□ -2.47
VTI1Q04338 YML054C-AYML054C-A 159 nt-0.36□□□□□ -2.47
VTI1Q04338 YOL083C-AYOL083C-A 141 nt-0.4□□□□□ -2.47
VTI1Q04338 TFB5YDR079C-A 219 nt-0.43□□□□□ -2.48
VTI1Q04338 YBL071C-BYBL071C-B 99 nt-0.44□□□□□ -2.48
VTI1Q04338 YJL113WYJL113W 4647 nt-0.45□□□□□ -2.48
VTI1Q04338 YHR180C-BYHR180C-B 105 nt-0.48□□□□□ -2.49
VTI1Q04338 YNL170WYNL170W 396 nt-0.48□□□□□ -2.49
VTI1Q04338 snR81snR81 201 nt-0.5□□□□□ -2.49
VTI1Q04338 YNL103W-AYNL103W-A 90 nt-0.51□□□□□ -2.49
VTI1Q04338 YOL164W-AYOL164W-A 183 nt-0.55□□□□□ -2.5
VTI1Q04338 ATP8Q0080 147 nt-0.57□□□□□ -2.5
VTI1Q04338 YBR109W-AYBR109W-A 225 nt-0.57□□□□□ -2.5
VTI1Q04338 YAL037C-AYAL037C-A 93 nt-0.58□□□□□ -2.5
VTI1Q04338 snR161snR161 161 nt-0.59□□□□□ -2.5
VTI1Q04338 snR47snR47 99 nt-0.6□□□□□ -2.51
VTI1Q04338 snR38snR38 95 nt-0.61□□□□□ -2.51
VTI1Q04338 YGL041C-BYGL041C-B 183 nt-0.62□□□□□ -2.51
VTI1Q04338 YOR376W-AYOR376W-A 156 nt-0.65□□□□□ -2.51
VTI1Q04338 RPL41AYDL184C 78 nt-0.66□□□□□ -2.52
VTI1Q04338 tS(GCU)Q1tS(GCU)Q1 86 nt-0.66□□□□□ -2.52
VTI1Q04338 snR33snR33 183 nt-0.66□□□□□ -2.52
VTI1Q04338 YGR240C-AYGR240C-A 201 nt-0.68□□□□□ -2.52
VTI1Q04338 YBR296C-AYBR296C-A 120 nt-0.68□□□□□ -2.52
VTI1Q04338 URB1YKL014C 5295 nt-0.68□□□□□ -2.52
VTI1Q04338 snR61snR61 90 nt-0.71□□□□□ -2.52
VTI1Q04338 Q0092Q0092 141 nt-0.72□□□□□ -2.52
VTI1Q04338 YKL106C-AYKL106C-A 120 nt-0.76□□□□□ -2.53
VTI1Q04338 YBL100W-CYBL100W-C 120 nt-0.76□□□□□ -2.53
VTI1Q04338 YHL009W-BYHL009W-B 5409 nt-0.76□□□□□ -2.53
VTI1Q04338 tP(UGG)QtP(UGG)Q 72 nt-0.79□□□□□ -2.54
VTI1Q04338 snR77snR77 88 nt-0.8□□□□□ -2.54
VTI1Q04338 tT(UGU)G1tT(UGU)G1 72 nt-0.8□□□□□ -2.54
VTI1Q04338 tT(UGU)G2tT(UGU)G2 72 nt-0.8□□□□□ -2.54
VTI1Q04338 tT(UGU)PtT(UGU)P 72 nt-0.8□□□□□ -2.54
VTI1Q04338 Q0143Q0143 153 nt-0.84□□□□□ -2.54
VTI1Q04338 YDR034C-AYDR034C-A 177 nt-0.85□□□□□ -2.55
VTI1Q04338 YKL225WYKL225W 348 nt-0.85□□□□□ -2.55
VTI1Q04338 YOR316C-AYOR316C-A 210 nt-0.89□□□□□ -2.55
VTI1Q04338 CDC65tQ(CUG)M 72 nt-0.91□□□□□ -2.56
VTI1Q04338 snR62snR62 100 nt-0.93□□□□□ -2.56
VTI1Q04338 YDL159W-AYDL159W-A 132 nt-1□□□□□ -2.57
VTI1Q04338 YMR315W-AYMR315W-A 108 nt-1.01□□□□□ -2.57
VTI1Q04338 YBL109WYBL109W 336 nt-1.03□□□□□ -2.57
VTI1Q04338 snR85snR85 171 nt-1.06□□□□□ -2.58
VTI1Q04338 YMR326CYMR326C 309 nt-1.06□□□□□ -2.58
Retrieved 100 of 7,029 protein–RNA pairs in 59.7 ms