Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 snR69snR69 101 nt0.98□□□□□ -2.25
SMX3P54999 YDR034C-AYDR034C-A 177 nt0.98□□□□□ -2.25
SMX3P54999 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
SMX3P54999 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
SMX3P54999 YGR240C-AYGR240C-A 201 nt0.96□□□□□ -2.26
SMX3P54999 IML1YJR138W 4755 nt0.96□□□□□ -2.26
SMX3P54999 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
SMX3P54999 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
SMX3P54999 YOR192C-BYOR192C-B 5313 nt0.94□□□□□ -2.26
SMX3P54999 YLR299C-AYLR299C-A 93 nt0.93□□□□□ -2.26
SMX3P54999 NST1YNL091W 3723 nt0.93□□□□□ -2.26
SMX3P54999 SIP4YJL089W 2490 nt0.93□□□□□ -2.26
SMX3P54999 YDL159C-BYDL159C-B 177 nt0.92□□□□□ -2.26
SMX3P54999 snR47snR47 99 nt0.92□□□□□ -2.26
SMX3P54999 SCC2YDR180W 4482 nt0.91□□□□□ -2.26
SMX3P54999 RDS3YPR094W 324 nt0.91□□□□□ -2.26
SMX3P54999 BUL2YML111W 2763 nt0.89□□□□□ -2.27
SMX3P54999 tV(UAC)BtV(UAC)B 74 nt0.88□□□□□ -2.27
SMX3P54999 tV(UAC)DtV(UAC)D 74 nt0.88□□□□□ -2.27
SMX3P54999 ORC3YLL004W 1851 nt0.87□□□□□ -2.27
SMX3P54999 PAU12YGR294W 363 nt0.87□□□□□ -2.27
SMX3P54999 tQ(UUG)QtQ(UUG)Q 76 nt0.85□□□□□ -2.27
SMX3P54999 YJL077W-AYJL077W-A 87 nt0.85□□□□□ -2.27
SMX3P54999 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
SMX3P54999 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
SMX3P54999 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
SMX3P54999 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
SMX3P54999 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
SMX3P54999 YPL060C-AYPL060C-A 3315 nt0.82□□□□□ -2.28
SMX3P54999 YDR371C-AYDR371C-A 105 nt0.82□□□□□ -2.28
SMX3P54999 PET111YMR257C 2403 nt0.81□□□□□ -2.28
SMX3P54999 YML054C-AYML054C-A 159 nt0.78□□□□□ -2.28
SMX3P54999 PAU24YBR301W 363 nt0.78□□□□□ -2.28
SMX3P54999 YHR180C-BYHR180C-B 105 nt0.76□□□□□ -2.29
SMX3P54999 YNL054W-BYNL054W-B 5250 nt0.74□□□□□ -2.29
SMX3P54999 snR50snR50 90 nt0.72□□□□□ -2.29
SMX3P54999 LTE1YAL024C 4308 nt0.71□□□□□ -2.3
SMX3P54999 YBR109W-AYBR109W-A 225 nt0.71□□□□□ -2.3
SMX3P54999 YER090C-AYER090C-A 90 nt0.7□□□□□ -2.3
SMX3P54999 snR64snR64 101 nt0.69□□□□□ -2.3
SMX3P54999 RPL41AYDL184C 78 nt0.69□□□□□ -2.3
SMX3P54999 YKL225WYKL225W 348 nt0.68□□□□□ -2.3
SMX3P54999 AI1Q0050 2505 nt0.65□□□□□ -2.31
SMX3P54999 YBR296C-AYBR296C-A 120 nt0.65□□□□□ -2.31
SMX3P54999 snR38snR38 95 nt0.63□□□□□ -2.31
SMX3P54999 snR53snR53 91 nt0.63□□□□□ -2.31
SMX3P54999 YBL100W-BYBL100W-B 5313 nt0.62□□□□□ -2.31
SMX3P54999 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
SMX3P54999 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
SMX3P54999 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SMX3P54999 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SMX3P54999 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
SMX3P54999 YMR160WYMR160W 2451 nt0.57□□□□□ -2.32
SMX3P54999 MLP1YKR095W 5628 nt0.55□□□□□ -2.32
SMX3P54999 snR67snR67 82 nt0.54□□□□□ -2.32
SMX3P54999 YOR186C-AYOR186C-A 210 nt0.51□□□□□ -2.33
SMX3P54999 YDL159W-AYDL159W-A 132 nt0.48□□□□□ -2.33
SMX3P54999 IQG1YPL242C 4488 nt0.48□□□□□ -2.33
SMX3P54999 MLP2YIL149C 5040 nt0.47□□□□□ -2.33
SMX3P54999 SKI7YOR076C 2244 nt0.46□□□□□ -2.34
SMX3P54999 THO2YNL139C 4794 nt0.42□□□□□ -2.34
SMX3P54999 YGR122C-AYGR122C-A 129 nt0.36□□□□□ -2.35
SMX3P54999 YML100W-AYML100W-A 174 nt0.36□□□□□ -2.35
SMX3P54999 SOV1YMR066W 2697 nt0.35□□□□□ -2.35
SMX3P54999 FMP27YLR454W 7887 nt0.34□□□□□ -2.36
SMX3P54999 UTP20YBL004W 7482 nt0.31□□□□□ -2.36
SMX3P54999 YLR149C-AYLR149C-A 87 nt0.3□□□□□ -2.36
SMX3P54999 snR128snR128 126 nt0.29□□□□□ -2.36
SMX3P54999 YKL106C-AYKL106C-A 120 nt0.28□□□□□ -2.36
SMX3P54999 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
SMX3P54999 PAU9YBL108C-A 129 nt0.2□□□□□ -2.38
SMX3P54999 ESP1YGR098C 4893 nt0.2□□□□□ -2.38
SMX3P54999 YOR376W-AYOR376W-A 156 nt0.14□□□□□ -2.39
SMX3P54999 YKL096C-BYKL096C-B 150 nt0.13□□□□□ -2.39
SMX3P54999 YDL114W-AYDL114W-A 114 nt0.1□□□□□ -2.39
SMX3P54999 tV(UAC)QtV(UAC)Q 76 nt0.03□□□□□ -2.4
SMX3P54999 YOR316C-AYOR316C-A 210 nt0.03□□□□□ -2.4
SMX3P54999 tA(UGC)QtA(UGC)Q 76 nt0.01□□□□□ -2.41
SMX3P54999 YKL145W-AYKL145W-A 93 nt0□□□□□ -2.41
SMX3P54999 SBH2YER019C-A 267 nt-0.03□□□□□ -2.41
SMX3P54999 YER078W-AYER078W-A 165 nt-0.05□□□□□ -2.42
SMX3P54999 snR77snR77 88 nt-0.06□□□□□ -2.42
SMX3P54999 tF(GAA)BtF(GAA)B 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)FtF(GAA)F 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)GtF(GAA)G 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)H1tF(GAA)H1 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)H2tF(GAA)H2 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)MtF(GAA)M 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)P1tF(GAA)P1 73 nt-0.07□□□□□ -2.42
SMX3P54999 tF(GAA)P2tF(GAA)P2 73 nt-0.07□□□□□ -2.42
SMX3P54999 snR75snR75 89 nt-0.1□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms