Protein–RNA interactions for Protein: P53953

SFB2, SED5-binding protein 2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB2P53953 VAM6YDL077C 3150 nt1.15□□□□□ -2.22
SFB2P53953 YLL006W-AYLL006W-A 177 nt1.14□□□□□ -2.23
SFB2P53953 YIL142C-AYIL142C-A 333 nt1.12□□□□□ -2.23
SFB2P53953 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
SFB2P53953 YOL083C-AYOL083C-A 141 nt1.1□□□□□ -2.23
SFB2P53953 LTE1YAL024C 4308 nt1.09□□□□□ -2.24
SFB2P53953 CSE1YGL238W 2883 nt1.08□□□□□ -2.24
SFB2P53953 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
SFB2P53953 tD(GUC)QtD(GUC)Q 75 nt1.06□□□□□ -2.24
SFB2P53953 MYO1YHR023W 5787 nt1.05□□□□□ -2.24
SFB2P53953 snR62snR62 100 nt1.04□□□□□ -2.24
SFB2P53953 YLL066W-BYLL066W-B 171 nt1.04□□□□□ -2.24
SFB2P53953 YBL071C-BYBL071C-B 99 nt1.04□□□□□ -2.24
SFB2P53953 YPL060C-AYPL060C-A 3315 nt1.03□□□□□ -2.24
SFB2P53953 YBL100W-CYBL100W-C 120 nt1.03□□□□□ -2.24
SFB2P53953 BEM2YER155C 6504 nt1.02□□□□□ -2.25
SFB2P53953 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
SFB2P53953 snR69snR69 101 nt1.02□□□□□ -2.25
SFB2P53953 RPS26AYGL189C 360 nt1.02□□□□□ -2.25
SFB2P53953 YJL077W-AYJL077W-A 87 nt1.02□□□□□ -2.25
SFB2P53953 EST1YLR233C 2100 nt1.02□□□□□ -2.25
SFB2P53953 YLR286W-AYLR286W-A 135 nt1.02□□□□□ -2.25
SFB2P53953 YOL014WYOL014W 375 nt1.01□□□□□ -2.25
SFB2P53953 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
SFB2P53953 UTP20YBL004W 7482 nt1□□□□□ -2.25
SFB2P53953 NIP1YMR309C 2439 nt1□□□□□ -2.25
SFB2P53953 YJR029WYJR029W 5268 nt1□□□□□ -2.25
SFB2P53953 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
SFB2P53953 snR45snR45 172 nt0.99□□□□□ -2.25
SFB2P53953 RDS3YPR094W 324 nt0.98□□□□□ -2.25
SFB2P53953 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
SFB2P53953 BUL2YML111W 2763 nt0.97□□□□□ -2.25
SFB2P53953 YOL164W-AYOL164W-A 183 nt0.96□□□□□ -2.26
SFB2P53953 YDL159C-BYDL159C-B 177 nt0.94□□□□□ -2.26
SFB2P53953 YLR299C-AYLR299C-A 93 nt0.94□□□□□ -2.26
SFB2P53953 PET111YMR257C 2403 nt0.92□□□□□ -2.26
SFB2P53953 YGR240C-AYGR240C-A 201 nt0.91□□□□□ -2.26
SFB2P53953 YOR192C-BYOR192C-B 5313 nt0.9□□□□□ -2.27
SFB2P53953 YMR160WYMR160W 2451 nt0.9□□□□□ -2.27
SFB2P53953 MLP1YKR095W 5628 nt0.89□□□□□ -2.27
SFB2P53953 YKL145W-AYKL145W-A 93 nt0.88□□□□□ -2.27
SFB2P53953 YDR034C-AYDR034C-A 177 nt0.87□□□□□ -2.27
SFB2P53953 YDR371C-AYDR371C-A 105 nt0.86□□□□□ -2.27
SFB2P53953 tQ(UUG)QtQ(UUG)Q 76 nt0.86□□□□□ -2.27
SFB2P53953 snR47snR47 99 nt0.82□□□□□ -2.28
SFB2P53953 IQG1YPL242C 4488 nt0.81□□□□□ -2.28
SFB2P53953 ORC3YLL004W 1851 nt0.75□□□□□ -2.29
SFB2P53953 YNL054W-BYNL054W-B 5250 nt0.75□□□□□ -2.29
SFB2P53953 YHR180C-BYHR180C-B 105 nt0.75□□□□□ -2.29
SFB2P53953 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
SFB2P53953 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
SFB2P53953 YER090C-AYER090C-A 90 nt0.73□□□□□ -2.29
SFB2P53953 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
SFB2P53953 YBL100W-BYBL100W-B 5313 nt0.72□□□□□ -2.29
SFB2P53953 YML054C-AYML054C-A 159 nt0.72□□□□□ -2.29
SFB2P53953 MLP2YIL149C 5040 nt0.71□□□□□ -2.3
SFB2P53953 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
SFB2P53953 YOR186C-AYOR186C-A 210 nt0.67□□□□□ -2.3
SFB2P53953 ESP1YGR098C 4893 nt0.65□□□□□ -2.3
SFB2P53953 AI1Q0050 2505 nt0.65□□□□□ -2.31
SFB2P53953 RPL41AYDL184C 78 nt0.65□□□□□ -2.31
SFB2P53953 snR50snR50 90 nt0.65□□□□□ -2.31
SFB2P53953 YBR296C-AYBR296C-A 120 nt0.62□□□□□ -2.31
SFB2P53953 YBR109W-AYBR109W-A 225 nt0.61□□□□□ -2.31
SFB2P53953 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
SFB2P53953 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
SFB2P53953 snR64snR64 101 nt0.57□□□□□ -2.32
SFB2P53953 snR67snR67 82 nt0.57□□□□□ -2.32
SFB2P53953 YKL225WYKL225W 348 nt0.57□□□□□ -2.32
SFB2P53953 snR53snR53 91 nt0.51□□□□□ -2.33
SFB2P53953 YER078W-AYER078W-A 165 nt0.48□□□□□ -2.33
SFB2P53953 snR38snR38 95 nt0.47□□□□□ -2.33
SFB2P53953 THO2YNL139C 4794 nt0.44□□□□□ -2.34
SFB2P53953 SOV1YMR066W 2697 nt0.37□□□□□ -2.35
SFB2P53953 YML100W-AYML100W-A 174 nt0.37□□□□□ -2.35
SFB2P53953 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
SFB2P53953 SKI7YOR076C 2244 nt0.34□□□□□ -2.35
SFB2P53953 snR128snR128 126 nt0.3□□□□□ -2.36
SFB2P53953 YKL106C-AYKL106C-A 120 nt0.2□□□□□ -2.38
SFB2P53953 YDL159W-AYDL159W-A 132 nt0.19□□□□□ -2.38
SFB2P53953 YGR122C-AYGR122C-A 129 nt0.18□□□□□ -2.38
SFB2P53953 PAU9YBL108C-A 129 nt0.14□□□□□ -2.39
SFB2P53953 YLR149C-AYLR149C-A 87 nt0.06□□□□□ -2.4
SFB2P53953 YOR376W-AYOR376W-A 156 nt-0.01□□□□□ -2.41
SFB2P53953 tA(UGC)QtA(UGC)Q 76 nt-0.02□□□□□ -2.41
SFB2P53953 YDL114W-AYDL114W-A 114 nt-0.05□□□□□ -2.42
SFB2P53953 YOR316C-AYOR316C-A 210 nt-0.05□□□□□ -2.42
SFB2P53953 YKL096C-BYKL096C-B 150 nt-0.06□□□□□ -2.42
SFB2P53953 SBH2YER019C-A 267 nt-0.08□□□□□ -2.42
SFB2P53953 tV(UAC)QtV(UAC)Q 76 nt-0.16□□□□□ -2.44
SFB2P53953 snR77snR77 88 nt-0.21□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms