Protein–RNA interactions for Protein: P53741

BRE5, UBP3-associated protein BRE5, yeastyeast

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE5P53741 PET111YMR257C 2403 nt0.85□□□□□ -2.27
BRE5P53741 YNL103W-AYNL103W-A 90 nt0.83□□□□□ -2.28
BRE5P53741 NIP1YMR309C 2439 nt0.83□□□□□ -2.28
BRE5P53741 YOR192C-BYOR192C-B 5313 nt0.82□□□□□ -2.28
BRE5P53741 snR61snR61 90 nt0.82□□□□□ -2.28
BRE5P53741 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
BRE5P53741 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
BRE5P53741 YBR178WYBR178W 375 nt0.8□□□□□ -2.28
BRE5P53741 TFB5YDR079C-A 219 nt0.78□□□□□ -2.28
BRE5P53741 MLP1YKR095W 5628 nt0.78□□□□□ -2.28
BRE5P53741 RPS26AYGL189C 360 nt0.77□□□□□ -2.29
BRE5P53741 SEC10YLR166C 2616 nt0.77□□□□□ -2.29
BRE5P53741 YDR371C-AYDR371C-A 105 nt0.76□□□□□ -2.29
BRE5P53741 YBR196C-AYBR196C-A 150 nt0.76□□□□□ -2.29
BRE5P53741 BUL2YML111W 2763 nt0.76□□□□□ -2.29
BRE5P53741 MYO1YHR023W 5787 nt0.75□□□□□ -2.29
BRE5P53741 RCO1YMR075W 2055 nt0.74□□□□□ -2.29
BRE5P53741 YJL077W-AYJL077W-A 87 nt0.72□□□□□ -2.29
BRE5P53741 YMR326CYMR326C 309 nt0.72□□□□□ -2.29
BRE5P53741 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
BRE5P53741 snR69snR69 101 nt0.71□□□□□ -2.3
BRE5P53741 EST1YLR233C 2100 nt0.7□□□□□ -2.3
BRE5P53741 YGL041C-BYGL041C-B 183 nt0.7□□□□□ -2.3
BRE5P53741 tD(GUC)QtD(GUC)Q 75 nt0.69□□□□□ -2.3
BRE5P53741 YDR524C-AYDR524C-A 120 nt0.67□□□□□ -2.3
BRE5P53741 ORC3YLL004W 1851 nt0.67□□□□□ -2.3
BRE5P53741 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
BRE5P53741 FMP27YLR454W 7887 nt0.66□□□□□ -2.3
BRE5P53741 AI1Q0050 2505 nt0.65□□□□□ -2.31
BRE5P53741 SBH1YER087C-B 249 nt0.65□□□□□ -2.31
BRE5P53741 RDS3YPR094W 324 nt0.65□□□□□ -2.31
BRE5P53741 YBL109WYBL109W 336 nt0.63□□□□□ -2.31
BRE5P53741 tQ(UUG)QtQ(UUG)Q 76 nt0.61□□□□□ -2.31
BRE5P53741 YAL037C-AYAL037C-A 93 nt0.61□□□□□ -2.31
BRE5P53741 YHR217CYHR217C 462 nt0.6□□□□□ -2.31
BRE5P53741 YLR286W-AYLR286W-A 135 nt0.6□□□□□ -2.31
BRE5P53741 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
BRE5P53741 YPL060C-AYPL060C-A 3315 nt0.59□□□□□ -2.32
BRE5P53741 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
BRE5P53741 snR81snR81 201 nt0.57□□□□□ -2.32
BRE5P53741 YDL159C-BYDL159C-B 177 nt0.57□□□□□ -2.32
BRE5P53741 YOL083C-AYOL083C-A 141 nt0.57□□□□□ -2.32
BRE5P53741 YOR186C-AYOR186C-A 210 nt0.57□□□□□ -2.32
BRE5P53741 YER078W-AYER078W-A 165 nt0.56□□□□□ -2.32
BRE5P53741 YBL100W-BYBL100W-B 5313 nt0.56□□□□□ -2.32
BRE5P53741 YLR299C-AYLR299C-A 93 nt0.54□□□□□ -2.32
BRE5P53741 MLP2YIL149C 5040 nt0.48□□□□□ -2.33
BRE5P53741 YBL071C-BYBL071C-B 99 nt0.48□□□□□ -2.33
BRE5P53741 YBL100W-CYBL100W-C 120 nt0.47□□□□□ -2.33
BRE5P53741 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
BRE5P53741 YOL164W-AYOL164W-A 183 nt0.41□□□□□ -2.34
BRE5P53741 YNL054W-BYNL054W-B 5250 nt0.4□□□□□ -2.35
BRE5P53741 YDL247W-AYDL247W-A 75 nt0.39□□□□□ -2.35
BRE5P53741 tS(GCU)Q1tS(GCU)Q1 86 nt0.39□□□□□ -2.35
BRE5P53741 snR50snR50 90 nt0.38□□□□□ -2.35
BRE5P53741 THO2YNL139C 4794 nt0.37□□□□□ -2.35
BRE5P53741 YHR180C-BYHR180C-B 105 nt0.34□□□□□ -2.36
BRE5P53741 YGR240C-AYGR240C-A 201 nt0.33□□□□□ -2.36
BRE5P53741 snR62snR62 100 nt0.32□□□□□ -2.36
BRE5P53741 YML054C-AYML054C-A 159 nt0.32□□□□□ -2.36
BRE5P53741 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
BRE5P53741 snR47snR47 99 nt0.29□□□□□ -2.36
BRE5P53741 snR67snR67 82 nt0.27□□□□□ -2.37
BRE5P53741 SOV1YMR066W 2697 nt0.25□□□□□ -2.37
BRE5P53741 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
BRE5P53741 snR128snR128 126 nt0.23□□□□□ -2.37
BRE5P53741 YDR034C-AYDR034C-A 177 nt0.22□□□□□ -2.37
BRE5P53741 YLL066W-BYLL066W-B 171 nt0.2□□□□□ -2.38
BRE5P53741 snR45snR45 172 nt0.19□□□□□ -2.38
BRE5P53741 RPL41AYDL184C 78 nt0.18□□□□□ -2.38
BRE5P53741 YML100W-AYML100W-A 174 nt0.17□□□□□ -2.38
BRE5P53741 YBR296C-AYBR296C-A 120 nt0.16□□□□□ -2.38
BRE5P53741 YBR109W-AYBR109W-A 225 nt0.13□□□□□ -2.39
BRE5P53741 PAU9YBL108C-A 129 nt0.01□□□□□ -2.41
BRE5P53741 YKL225WYKL225W 348 nt0□□□□□ -2.41
BRE5P53741 snR38snR38 95 nt-0.02□□□□□ -2.41
BRE5P53741 SKI7YOR076C 2244 nt-0.03□□□□□ -2.41
BRE5P53741 YJL113WYJL113W 4647 nt-0.07□□□□□ -2.42
BRE5P53741 snR64snR64 101 nt-0.1□□□□□ -2.43
BRE5P53741 SBH2YER019C-A 267 nt-0.12□□□□□ -2.43
BRE5P53741 tA(UGC)QtA(UGC)Q 76 nt-0.17□□□□□ -2.44
BRE5P53741 YKL106C-AYKL106C-A 120 nt-0.18□□□□□ -2.44
BRE5P53741 snR53snR53 91 nt-0.28□□□□□ -2.45
BRE5P53741 YOR376W-AYOR376W-A 156 nt-0.34□□□□□ -2.46
BRE5P53741 YDL159W-AYDL159W-A 132 nt-0.39□□□□□ -2.47
BRE5P53741 YGR122C-AYGR122C-A 129 nt-0.39□□□□□ -2.47
BRE5P53741 snR161snR161 161 nt-0.4□□□□□ -2.47
BRE5P53741 YOR316C-AYOR316C-A 210 nt-0.41□□□□□ -2.48
BRE5P53741 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
BRE5P53741 YDL114W-AYDL114W-A 114 nt-0.54□□□□□ -2.5
BRE5P53741 snR33snR33 183 nt-0.58□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 76.9 ms