Protein–RNA interactions for Protein: P50079

HSV2, SVP1-like protein 2, yeastyeast

Predicted RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSV2P50079 snR45snR45 172 nt1.06□□□□□ -2.24
HSV2P50079 tF(GAA)BtF(GAA)B 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)FtF(GAA)F 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)GtF(GAA)G 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)H1tF(GAA)H1 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)H2tF(GAA)H2 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)MtF(GAA)M 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)P1tF(GAA)P1 73 nt1.05□□□□□ -2.24
HSV2P50079 tF(GAA)P2tF(GAA)P2 73 nt1.05□□□□□ -2.24
HSV2P50079 RPS26AYGL189C 360 nt1.04□□□□□ -2.24
HSV2P50079 YLL006W-AYLL006W-A 177 nt1.02□□□□□ -2.25
HSV2P50079 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
HSV2P50079 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
HSV2P50079 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
HSV2P50079 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
HSV2P50079 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
HSV2P50079 EST1YLR233C 2100 nt1□□□□□ -2.25
HSV2P50079 snR62snR62 100 nt1□□□□□ -2.25
HSV2P50079 YLR286W-AYLR286W-A 135 nt0.99□□□□□ -2.25
HSV2P50079 CSE1YGL238W 2883 nt0.99□□□□□ -2.25
HSV2P50079 VAM6YDL077C 3150 nt0.98□□□□□ -2.25
HSV2P50079 BUL2YML111W 2763 nt0.98□□□□□ -2.25
HSV2P50079 snR69snR69 101 nt0.97□□□□□ -2.25
HSV2P50079 tD(GUC)QtD(GUC)Q 75 nt0.97□□□□□ -2.25
HSV2P50079 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
HSV2P50079 YOR192C-BYOR192C-B 5313 nt0.95□□□□□ -2.26
HSV2P50079 NIP1YMR309C 2439 nt0.95□□□□□ -2.26
HSV2P50079 YOL164W-AYOL164W-A 183 nt0.95□□□□□ -2.26
HSV2P50079 YOL014WYOL014W 375 nt0.91□□□□□ -2.26
HSV2P50079 YNL054W-BYNL054W-B 5250 nt0.89□□□□□ -2.27
HSV2P50079 UTP20YBL004W 7482 nt0.88□□□□□ -2.27
HSV2P50079 YGR240C-AYGR240C-A 201 nt0.88□□□□□ -2.27
HSV2P50079 PET111YMR257C 2403 nt0.88□□□□□ -2.27
HSV2P50079 YDR034C-AYDR034C-A 177 nt0.87□□□□□ -2.27
HSV2P50079 RDS3YPR094W 324 nt0.87□□□□□ -2.27
HSV2P50079 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
HSV2P50079 BEM2YER155C 6504 nt0.87□□□□□ -2.27
HSV2P50079 MLP1YKR095W 5628 nt0.86□□□□□ -2.27
HSV2P50079 YDL159C-BYDL159C-B 177 nt0.86□□□□□ -2.27
HSV2P50079 YLR299C-AYLR299C-A 93 nt0.86□□□□□ -2.27
HSV2P50079 YDR371C-AYDR371C-A 105 nt0.85□□□□□ -2.27
HSV2P50079 YBL100W-CYBL100W-C 120 nt0.85□□□□□ -2.27
HSV2P50079 ORC3YLL004W 1851 nt0.84□□□□□ -2.27
HSV2P50079 snR47snR47 99 nt0.83□□□□□ -2.28
HSV2P50079 YJL077W-AYJL077W-A 87 nt0.82□□□□□ -2.28
HSV2P50079 YKL145W-AYKL145W-A 93 nt0.81□□□□□ -2.28
HSV2P50079 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
HSV2P50079 YPR159C-AYPR159C-A 102 nt0.78□□□□□ -2.28
HSV2P50079 tQ(UUG)QtQ(UUG)Q 76 nt0.76□□□□□ -2.29
HSV2P50079 YML054C-AYML054C-A 159 nt0.73□□□□□ -2.29
HSV2P50079 YBL100W-BYBL100W-B 5313 nt0.71□□□□□ -2.3
HSV2P50079 snR50snR50 90 nt0.69□□□□□ -2.3
HSV2P50079 YER090C-AYER090C-A 90 nt0.68□□□□□ -2.3
HSV2P50079 YHR180C-BYHR180C-B 105 nt0.67□□□□□ -2.3
HSV2P50079 YBR109W-AYBR109W-A 225 nt0.67□□□□□ -2.3
HSV2P50079 MLP2YIL149C 5040 nt0.66□□□□□ -2.3
HSV2P50079 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
HSV2P50079 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
HSV2P50079 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
HSV2P50079 snR38snR38 95 nt0.61□□□□□ -2.31
HSV2P50079 YKL225WYKL225W 348 nt0.6□□□□□ -2.31
HSV2P50079 snR64snR64 101 nt0.59□□□□□ -2.31
HSV2P50079 RPL41AYDL184C 78 nt0.59□□□□□ -2.31
HSV2P50079 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
HSV2P50079 YOR186C-AYOR186C-A 210 nt0.58□□□□□ -2.32
HSV2P50079 YBR296C-AYBR296C-A 120 nt0.56□□□□□ -2.32
HSV2P50079 AI1Q0050 2505 nt0.56□□□□□ -2.32
HSV2P50079 snR53snR53 91 nt0.53□□□□□ -2.32
HSV2P50079 snR67snR67 82 nt0.49□□□□□ -2.33
HSV2P50079 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
HSV2P50079 YER078W-AYER078W-A 165 nt0.44□□□□□ -2.34
HSV2P50079 SOV1YMR066W 2697 nt0.43□□□□□ -2.34
HSV2P50079 ESP1YGR098C 4893 nt0.43□□□□□ -2.34
HSV2P50079 THO2YNL139C 4794 nt0.4□□□□□ -2.35
HSV2P50079 YDL159W-AYDL159W-A 132 nt0.38□□□□□ -2.35
HSV2P50079 YML100W-AYML100W-A 174 nt0.38□□□□□ -2.35
HSV2P50079 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
HSV2P50079 SKI7YOR076C 2244 nt0.34□□□□□ -2.35
HSV2P50079 YGR122C-AYGR122C-A 129 nt0.24□□□□□ -2.37
HSV2P50079 snR128snR128 126 nt0.24□□□□□ -2.37
HSV2P50079 YLR149C-AYLR149C-A 87 nt0.2□□□□□ -2.38
HSV2P50079 YKL106C-AYKL106C-A 120 nt0.18□□□□□ -2.38
HSV2P50079 YOR376W-AYOR376W-A 156 nt0.11□□□□□ -2.39
HSV2P50079 PAU9YBL108C-A 129 nt0.09□□□□□ -2.4
HSV2P50079 tA(UGC)QtA(UGC)Q 76 nt0□□□□□ -2.41
HSV2P50079 YDL114W-AYDL114W-A 114 nt-0.01□□□□□ -2.41
HSV2P50079 tV(UAC)QtV(UAC)Q 76 nt-0.01□□□□□ -2.41
HSV2P50079 YKL096C-BYKL096C-B 150 nt-0.03□□□□□ -2.41
HSV2P50079 YOR316C-AYOR316C-A 210 nt-0.03□□□□□ -2.41
HSV2P50079 SBH2YER019C-A 267 nt-0.13□□□□□ -2.43
HSV2P50079 snR77snR77 88 nt-0.14□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 48.5 ms