Protein–RNA interactions for Protein: P48837

NUP57, Nucleoporin NUP57, yeastyeast

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP57P48837 tM(CAU)Q2tM(CAU)Q2 78 nt0.01□□□□□ -2.41
NUP57P48837 SPG3YDR504C 384 nt-0.01□□□□□ -2.41
NUP57P48837 YJL150WYJL150W 303 nt-0.01□□□□□ -2.41
NUP57P48837 YLR342W-AYLR342W-A 174 nt-0.01□□□□□ -2.41
NUP57P48837 JLP2YMR132C 627 nt-0.01□□□□□ -2.41
NUP57P48837 tL(UAA)QtL(UAA)Q 85 nt-0.02□□□□□ -2.41
NUP57P48837 YBL053WYBL053W 375 nt-0.02□□□□□ -2.41
NUP57P48837 snR128snR128 126 nt-0.02□□□□□ -2.41
NUP57P48837 snR45snR45 172 nt-0.02□□□□□ -2.41
NUP57P48837 YGR164WYGR164W 336 nt-0.04□□□□□ -2.42
NUP57P48837 YHL015W-AYHL015W-A 84 nt-0.04□□□□□ -2.42
NUP57P48837 snR48snR48 113 nt-0.05□□□□□ -2.42
NUP57P48837 YNL198CYNL198C 303 nt-0.06□□□□□ -2.42
NUP57P48837 snR69snR69 101 nt-0.07□□□□□ -2.42
NUP57P48837 YOR102WYOR102W 351 nt-0.07□□□□□ -2.42
NUP57P48837 YGR146C-AYGR146C-A 162 nt-0.08□□□□□ -2.42
NUP57P48837 tQ(UUG)QtQ(UUG)Q 76 nt-0.08□□□□□ -2.42
NUP57P48837 YMR046W-AYMR046W-A 129 nt-0.08□□□□□ -2.42
NUP57P48837 YNL067W-BYNL067W-B 141 nt-0.08□□□□□ -2.42
NUP57P48837 YPL060C-AYPL060C-A 3315 nt-0.08□□□□□ -2.42
NUP57P48837 YDL007C-AYDL007C-A 258 nt-0.09□□□□□ -2.42
NUP57P48837 PMP2YEL017C-A 132 nt-0.1□□□□□ -2.43
NUP57P48837 YJL077W-AYJL077W-A 87 nt-0.11□□□□□ -2.43
NUP57P48837 snR50snR50 90 nt-0.11□□□□□ -2.43
NUP57P48837 YBR178WYBR178W 375 nt-0.12□□□□□ -2.43
NUP57P48837 tM(CAU)Q1tM(CAU)Q1 76 nt-0.13□□□□□ -2.43
NUP57P48837 RDS3YPR094W 324 nt-0.13□□□□□ -2.43
NUP57P48837 YML100W-AYML100W-A 174 nt-0.14□□□□□ -2.43
NUP57P48837 YNL205CYNL205C 423 nt-0.14□□□□□ -2.43
NUP57P48837 SBH2YER019C-A 267 nt-0.15□□□□□ -2.43
NUP57P48837 YGR151CYGR151C 336 nt-0.15□□□□□ -2.43
NUP57P48837 YLR466C-BYLR466C-B 117 nt-0.15□□□□□ -2.43
NUP57P48837 YNL266WYNL266W 420 nt-0.15□□□□□ -2.43
NUP57P48837 SEC10YLR166C 2616 nt-0.15□□□□□ -2.43
NUP57P48837 tD(GUC)QtD(GUC)Q 75 nt-0.16□□□□□ -2.44
NUP57P48837 YNL338WYNL338W 159 nt-0.16□□□□□ -2.44
NUP57P48837 TFB5YDR079C-A 219 nt-0.17□□□□□ -2.44
NUP57P48837 YER090C-AYER090C-A 90 nt-0.17□□□□□ -2.44
NUP57P48837 PAU9YBL108C-A 129 nt-0.17□□□□□ -2.44
NUP57P48837 YIL071W-AYIL071W-A 477 nt-0.18□□□□□ -2.44
NUP57P48837 YLR286W-AYLR286W-A 135 nt-0.18□□□□□ -2.44
NUP57P48837 YDL159C-BYDL159C-B 177 nt-0.19□□□□□ -2.44
NUP57P48837 RPM2YML091C 3609 nt-0.2□□□□□ -2.44
NUP57P48837 SOM1YEL059C-A 225 nt-0.21□□□□□ -2.44
NUP57P48837 YBR196C-AYBR196C-A 150 nt-0.21□□□□□ -2.44
NUP57P48837 tA(UGC)QtA(UGC)Q 76 nt-0.23□□□□□ -2.45
NUP57P48837 snR67snR67 82 nt-0.25□□□□□ -2.45
NUP57P48837 YLR299C-AYLR299C-A 93 nt-0.25□□□□□ -2.45
NUP57P48837 YNL337WYNL337W 255 nt-0.26□□□□□ -2.45
NUP57P48837 YCL001W-BYCL001W-B 255 nt-0.26□□□□□ -2.45
NUP57P48837 SKI7YOR076C 2244 nt-0.28□□□□□ -2.45
NUP57P48837 YCR095W-AYCR095W-A 159 nt-0.28□□□□□ -2.45
NUP57P48837 YML054C-AYML054C-A 159 nt-0.29□□□□□ -2.46
NUP57P48837 YJL113WYJL113W 4647 nt-0.31□□□□□ -2.46
NUP57P48837 YGL007C-AYGL007C-A 87 nt-0.32□□□□□ -2.46
NUP57P48837 Q0032Q0032 291 nt-0.34□□□□□ -2.46
NUP57P48837 YHR180C-BYHR180C-B 105 nt-0.36□□□□□ -2.47
NUP57P48837 YOL083C-AYOL083C-A 141 nt-0.36□□□□□ -2.47
NUP57P48837 snR161snR161 161 nt-0.37□□□□□ -2.47
NUP57P48837 URB1YKL014C 5295 nt-0.38□□□□□ -2.47
NUP57P48837 YLR294CYLR294C 330 nt-0.39□□□□□ -2.47
NUP57P48837 YBL071C-BYBL071C-B 99 nt-0.39□□□□□ -2.47
NUP57P48837 YOR225WYOR225W 330 nt-0.39□□□□□ -2.47
NUP57P48837 snR33snR33 183 nt-0.39□□□□□ -2.47
NUP57P48837 snR81snR81 201 nt-0.44□□□□□ -2.48
NUP57P48837 YBR109W-AYBR109W-A 225 nt-0.44□□□□□ -2.48
NUP57P48837 YOL164W-AYOL164W-A 183 nt-0.45□□□□□ -2.48
NUP57P48837 YAL037C-AYAL037C-A 93 nt-0.46□□□□□ -2.48
NUP57P48837 YOR376W-AYOR376W-A 156 nt-0.46□□□□□ -2.48
NUP57P48837 snR47snR47 99 nt-0.47□□□□□ -2.48
NUP57P48837 RPL41AYDL184C 78 nt-0.48□□□□□ -2.49
NUP57P48837 tT(UGU)G1tT(UGU)G1 72 nt-0.48□□□□□ -2.49
NUP57P48837 tT(UGU)G2tT(UGU)G2 72 nt-0.48□□□□□ -2.49
NUP57P48837 tT(UGU)PtT(UGU)P 72 nt-0.48□□□□□ -2.49
NUP57P48837 snR38snR38 95 nt-0.48□□□□□ -2.49
NUP57P48837 YBR296C-AYBR296C-A 120 nt-0.48□□□□□ -2.49
NUP57P48837 tP(UGG)QtP(UGG)Q 72 nt-0.49□□□□□ -2.49
NUP57P48837 YNL103W-AYNL103W-A 90 nt-0.5□□□□□ -2.49
NUP57P48837 YGL041C-BYGL041C-B 183 nt-0.51□□□□□ -2.49
NUP57P48837 YGR240C-AYGR240C-A 201 nt-0.51□□□□□ -2.49
NUP57P48837 YKL106C-AYKL106C-A 120 nt-0.51□□□□□ -2.49
NUP57P48837 YNL170WYNL170W 396 nt-0.51□□□□□ -2.49
NUP57P48837 tS(GCU)Q1tS(GCU)Q1 86 nt-0.53□□□□□ -2.49
NUP57P48837 YBL100W-CYBL100W-C 120 nt-0.53□□□□□ -2.49
NUP57P48837 snR77snR77 88 nt-0.54□□□□□ -2.5
NUP57P48837 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
NUP57P48837 snR61snR61 90 nt-0.57□□□□□ -2.5
NUP57P48837 ATP8Q0080 147 nt-0.57□□□□□ -2.5
NUP57P48837 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
NUP57P48837 YOR316C-AYOR316C-A 210 nt-0.58□□□□□ -2.5
NUP57P48837 YKL225WYKL225W 348 nt-0.62□□□□□ -2.51
NUP57P48837 YDR034C-AYDR034C-A 177 nt-0.63□□□□□ -2.51
NUP57P48837 YMR315W-AYMR315W-A 108 nt-0.63□□□□□ -2.51
NUP57P48837 snR62snR62 100 nt-0.68□□□□□ -2.52
NUP57P48837 Q0092Q0092 141 nt-0.68□□□□□ -2.52
NUP57P48837 Q0143Q0143 153 nt-0.72□□□□□ -2.52
NUP57P48837 YDL159W-AYDL159W-A 132 nt-0.73□□□□□ -2.53
NUP57P48837 tY(GUA)QtY(GUA)Q 84 nt-0.75□□□□□ -2.53
NUP57P48837 YDL114W-AYDL114W-A 114 nt-0.76□□□□□ -2.53
NUP57P48837 YBR223W-AYBR223W-A 120 nt-0.77□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 7.1 ms