Protein–RNA interactions for Protein: P47047

MTR4, ATP-dependent RNA helicase DOB1, yeastyeast

Known RBP Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MTR4P47047 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
MTR4P47047 tD(GUC)QtD(GUC)Q 75 nt1.31□□□□□ -2.2
MTR4P47047 EST1YLR233C 2100 nt1.31□□□□□ -2.2
MTR4P47047 YGR240C-AYGR240C-A 201 nt1.29□□□□□ -2.2
MTR4P47047 YBL100W-CYBL100W-C 120 nt1.29□□□□□ -2.2
MTR4P47047 UTP20YBL004W 7482 nt1.29□□□□□ -2.2
MTR4P47047 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
MTR4P47047 CSE1YGL238W 2883 nt1.27□□□□□ -2.21
MTR4P47047 snR69snR69 101 nt1.26□□□□□ -2.21
MTR4P47047 SCC2YDR180W 4482 nt1.26□□□□□ -2.21
MTR4P47047 BUL2YML111W 2763 nt1.25□□□□□ -2.21
MTR4P47047 BEM2YER155C 6504 nt1.24□□□□□ -2.21
MTR4P47047 RKR1YMR247C 4689 nt1.23□□□□□ -2.21
MTR4P47047 ORC3YLL004W 1851 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)BtF(GAA)B 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)FtF(GAA)F 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)GtF(GAA)G 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)H1tF(GAA)H1 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)H2tF(GAA)H2 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)MtF(GAA)M 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)P1tF(GAA)P1 73 nt1.23□□□□□ -2.21
MTR4P47047 tF(GAA)P2tF(GAA)P2 73 nt1.23□□□□□ -2.21
MTR4P47047 DOP1YDR141C 5097 nt1.22□□□□□ -2.21
MTR4P47047 snR47snR47 99 nt1.21□□□□□ -2.22
MTR4P47047 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
MTR4P47047 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
MTR4P47047 NIP1YMR309C 2439 nt1.2□□□□□ -2.22
MTR4P47047 VAM6YDL077C 3150 nt1.19□□□□□ -2.22
MTR4P47047 YLR299C-AYLR299C-A 93 nt1.19□□□□□ -2.22
MTR4P47047 YDL159C-BYDL159C-B 177 nt1.18□□□□□ -2.22
MTR4P47047 RDS3YPR094W 324 nt1.18□□□□□ -2.22
MTR4P47047 YJL077W-AYJL077W-A 87 nt1.13□□□□□ -2.23
MTR4P47047 YNL054W-BYNL054W-B 5250 nt1.13□□□□□ -2.23
MTR4P47047 YOR192C-BYOR192C-B 5313 nt1.11□□□□□ -2.23
MTR4P47047 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
MTR4P47047 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
MTR4P47047 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
MTR4P47047 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
MTR4P47047 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
MTR4P47047 YMR160WYMR160W 2451 nt1.1□□□□□ -2.23
MTR4P47047 YDR371C-AYDR371C-A 105 nt1.02□□□□□ -2.25
MTR4P47047 YML054C-AYML054C-A 159 nt1.02□□□□□ -2.25
MTR4P47047 tQ(UUG)QtQ(UUG)Q 76 nt1.01□□□□□ -2.25
MTR4P47047 snR64snR64 101 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)BtT(AGU)B 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)CtT(AGU)C 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)DtT(AGU)D 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)HtT(AGU)H 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)I1tT(AGU)I1 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)I2tT(AGU)I2 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)JtT(AGU)J 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)N1tT(AGU)N1 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)N2tT(AGU)N2 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)O1tT(AGU)O1 73 nt1□□□□□ -2.25
MTR4P47047 tT(AGU)O2tT(AGU)O2 73 nt1□□□□□ -2.25
MTR4P47047 YOL014WYOL014W 375 nt1□□□□□ -2.25
MTR4P47047 snR53snR53 91 nt1□□□□□ -2.25
MTR4P47047 YHR180C-BYHR180C-B 105 nt0.99□□□□□ -2.25
MTR4P47047 YBR109W-AYBR109W-A 225 nt0.99□□□□□ -2.25
MTR4P47047 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
MTR4P47047 PET111YMR257C 2403 nt0.96□□□□□ -2.26
MTR4P47047 YKL225WYKL225W 348 nt0.95□□□□□ -2.26
MTR4P47047 YER090C-AYER090C-A 90 nt0.94□□□□□ -2.26
MTR4P47047 RPL41AYDL184C 78 nt0.92□□□□□ -2.26
MTR4P47047 snR38snR38 95 nt0.91□□□□□ -2.26
MTR4P47047 snR50snR50 90 nt0.91□□□□□ -2.26
MTR4P47047 YBL100W-BYBL100W-B 5313 nt0.91□□□□□ -2.26
MTR4P47047 YKL145W-AYKL145W-A 93 nt0.89□□□□□ -2.27
MTR4P47047 YBR296C-AYBR296C-A 120 nt0.89□□□□□ -2.27
MTR4P47047 AI1Q0050 2505 nt0.85□□□□□ -2.27
MTR4P47047 FMP27YLR454W 7887 nt0.85□□□□□ -2.27
MTR4P47047 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
MTR4P47047 MLP1YKR095W 5628 nt0.79□□□□□ -2.28
MTR4P47047 snR67snR67 82 nt0.72□□□□□ -2.29
MTR4P47047 IQG1YPL242C 4488 nt0.71□□□□□ -2.3
MTR4P47047 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
MTR4P47047 YDL159W-AYDL159W-A 132 nt0.69□□□□□ -2.3
MTR4P47047 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
MTR4P47047 SKI7YOR076C 2244 nt0.66□□□□□ -2.3
MTR4P47047 YOR186C-AYOR186C-A 210 nt0.64□□□□□ -2.31
MTR4P47047 THO2YNL139C 4794 nt0.62□□□□□ -2.31
MTR4P47047 MLP2YIL149C 5040 nt0.6□□□□□ -2.31
MTR4P47047 YLR149C-AYLR149C-A 87 nt0.57□□□□□ -2.32
MTR4P47047 YGR122C-AYGR122C-A 129 nt0.56□□□□□ -2.32
MTR4P47047 SOV1YMR066W 2697 nt0.56□□□□□ -2.32
MTR4P47047 ESP1YGR098C 4893 nt0.54□□□□□ -2.32
MTR4P47047 YML100W-AYML100W-A 174 nt0.53□□□□□ -2.32
MTR4P47047 YER078W-AYER078W-A 165 nt0.49□□□□□ -2.33
MTR4P47047 YKL106C-AYKL106C-A 120 nt0.4□□□□□ -2.35
MTR4P47047 YKL096C-BYKL096C-B 150 nt0.39□□□□□ -2.35
MTR4P47047 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
MTR4P47047 snR128snR128 126 nt0.32□□□□□ -2.36
MTR4P47047 YOR376W-AYOR376W-A 156 nt0.26□□□□□ -2.37
MTR4P47047 YDL114W-AYDL114W-A 114 nt0.23□□□□□ -2.37
MTR4P47047 tV(UAC)QtV(UAC)Q 76 nt0.21□□□□□ -2.38
MTR4P47047 PAU9YBL108C-A 129 nt0.18□□□□□ -2.38
MTR4P47047 YOR316C-AYOR316C-A 210 nt0.15□□□□□ -2.39
MTR4P47047 snR75snR75 89 nt0.08□□□□□ -2.4
MTR4P47047 tA(UGC)QtA(UGC)Q 76 nt0.07□□□□□ -2.4
MTR4P47047 SBH2YER019C-A 267 nt0.05□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms