Protein–RNA interactions for Protein: P42900

SLS1, Sigma-like sequence protein 1, mitochondrial, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLS1P42900 ORC3YLL004W 1851 nt1.18□□□□□ -2.22
SLS1P42900 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
SLS1P42900 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
SLS1P42900 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
SLS1P42900 PAU12YGR294W 363 nt1.14□□□□□ -2.23
SLS1P42900 SCC2YDR180W 4482 nt1.14□□□□□ -2.23
SLS1P42900 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
SLS1P42900 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
SLS1P42900 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
SLS1P42900 LTE1YAL024C 4308 nt1.11□□□□□ -2.23
SLS1P42900 YHR180C-BYHR180C-B 105 nt1.09□□□□□ -2.23
SLS1P42900 snR53snR53 91 nt1.09□□□□□ -2.23
SLS1P42900 RKR1YMR247C 4689 nt1.09□□□□□ -2.24
SLS1P42900 snR64snR64 101 nt1.08□□□□□ -2.24
SLS1P42900 tQ(UUG)QtQ(UUG)Q 76 nt1.08□□□□□ -2.24
SLS1P42900 VAM6YDL077C 3150 nt1.07□□□□□ -2.24
SLS1P42900 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
SLS1P42900 YML054C-AYML054C-A 159 nt1.06□□□□□ -2.24
SLS1P42900 YOR192C-BYOR192C-B 5313 nt1.03□□□□□ -2.24
SLS1P42900 DOP1YDR141C 5097 nt1.03□□□□□ -2.25
SLS1P42900 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
SLS1P42900 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
SLS1P42900 RPL41AYDL184C 78 nt1.01□□□□□ -2.25
SLS1P42900 PET111YMR257C 2403 nt1□□□□□ -2.25
SLS1P42900 YKL225WYKL225W 348 nt1□□□□□ -2.25
SLS1P42900 YBR296C-AYBR296C-A 120 nt0.99□□□□□ -2.25
SLS1P42900 YDR371C-AYDR371C-A 105 nt0.98□□□□□ -2.25
SLS1P42900 YBR109W-AYBR109W-A 225 nt0.98□□□□□ -2.25
SLS1P42900 YER090C-AYER090C-A 90 nt0.96□□□□□ -2.26
SLS1P42900 BEM2YER155C 6504 nt0.95□□□□□ -2.26
SLS1P42900 snR50snR50 90 nt0.95□□□□□ -2.26
SLS1P42900 MYO1YHR023W 5787 nt0.94□□□□□ -2.26
SLS1P42900 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
SLS1P42900 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
SLS1P42900 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
SLS1P42900 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
SLS1P42900 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
SLS1P42900 MLP1YKR095W 5628 nt0.92□□□□□ -2.26
SLS1P42900 PAU24YBR301W 363 nt0.91□□□□□ -2.26
SLS1P42900 UTP20YBL004W 7482 nt0.88□□□□□ -2.27
SLS1P42900 AI1Q0050 2505 nt0.86□□□□□ -2.27
SLS1P42900 MLP2YIL149C 5040 nt0.86□□□□□ -2.27
SLS1P42900 snR38snR38 95 nt0.85□□□□□ -2.27
SLS1P42900 YBL100W-BYBL100W-B 5313 nt0.83□□□□□ -2.28
SLS1P42900 YNL054W-BYNL054W-B 5250 nt0.82□□□□□ -2.28
SLS1P42900 snR67snR67 82 nt0.81□□□□□ -2.28
SLS1P42900 IQG1YPL242C 4488 nt0.79□□□□□ -2.28
SLS1P42900 SKI7YOR076C 2244 nt0.77□□□□□ -2.29
SLS1P42900 tF(GAA)BtF(GAA)B 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)FtF(GAA)F 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)GtF(GAA)G 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)H1tF(GAA)H1 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)H2tF(GAA)H2 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)MtF(GAA)M 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)P1tF(GAA)P1 73 nt0.75□□□□□ -2.29
SLS1P42900 tF(GAA)P2tF(GAA)P2 73 nt0.75□□□□□ -2.29
SLS1P42900 YOR186C-AYOR186C-A 210 nt0.75□□□□□ -2.29
SLS1P42900 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
SLS1P42900 YMR160WYMR160W 2451 nt0.72□□□□□ -2.29
SLS1P42900 YDL159W-AYDL159W-A 132 nt0.65□□□□□ -2.31
SLS1P42900 YGR122C-AYGR122C-A 129 nt0.64□□□□□ -2.31
SLS1P42900 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SLS1P42900 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
SLS1P42900 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
SLS1P42900 YLR149C-AYLR149C-A 87 nt0.6□□□□□ -2.31
SLS1P42900 YOL014WYOL014W 375 nt0.6□□□□□ -2.31
SLS1P42900 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
SLS1P42900 YKL145W-AYKL145W-A 93 nt0.57□□□□□ -2.32
SLS1P42900 YKL096C-BYKL096C-B 150 nt0.54□□□□□ -2.32
SLS1P42900 YML100W-AYML100W-A 174 nt0.52□□□□□ -2.33
SLS1P42900 YKL106C-AYKL106C-A 120 nt0.49□□□□□ -2.33
SLS1P42900 SOV1YMR066W 2697 nt0.47□□□□□ -2.33
SLS1P42900 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
SLS1P42900 ESP1YGR098C 4893 nt0.44□□□□□ -2.34
SLS1P42900 THO2YNL139C 4794 nt0.43□□□□□ -2.34
SLS1P42900 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
SLS1P42900 snR128snR128 126 nt0.37□□□□□ -2.35
SLS1P42900 YDL114W-AYDL114W-A 114 nt0.32□□□□□ -2.36
SLS1P42900 YER078W-AYER078W-A 165 nt0.27□□□□□ -2.37
SLS1P42900 PAU9YBL108C-A 129 nt0.27□□□□□ -2.37
SLS1P42900 snR75snR75 89 nt0.24□□□□□ -2.37
SLS1P42900 YOR376W-AYOR376W-A 156 nt0.24□□□□□ -2.37
SLS1P42900 YOR316C-AYOR316C-A 210 nt0.2□□□□□ -2.38
SLS1P42900 tV(UAC)QtV(UAC)Q 76 nt0.19□□□□□ -2.38
SLS1P42900 SBH2YER019C-A 267 nt0.14□□□□□ -2.39
SLS1P42900 snR77snR77 88 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms