Protein–RNA interactions for Protein: P38957

SHU2, Suppressor of hydroxyurea sensitivity protein 2, yeastyeast

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHU2P38957 ORC3YLL004W 1851 nt1.22□□□□□ -2.21
SHU2P38957 YBL100W-CYBL100W-C 120 nt1.22□□□□□ -2.21
SHU2P38957 YPR117WYPR117W 7470 nt1.21□□□□□ -2.22
SHU2P38957 HUG1YML058W-A 207 nt1.21□□□□□ -2.22
SHU2P38957 NIP1YMR309C 2439 nt1.21□□□□□ -2.22
SHU2P38957 YNL054W-BYNL054W-B 5250 nt1.2□□□□□ -2.22
SHU2P38957 snR47snR47 99 nt1.18□□□□□ -2.22
SHU2P38957 YLR299C-AYLR299C-A 93 nt1.17□□□□□ -2.22
SHU2P38957 RDS3YPR094W 324 nt1.16□□□□□ -2.22
SHU2P38957 YOR192C-BYOR192C-B 5313 nt1.15□□□□□ -2.22
SHU2P38957 YDL159C-BYDL159C-B 177 nt1.15□□□□□ -2.23
SHU2P38957 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
SHU2P38957 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
SHU2P38957 PAU12YGR294W 363 nt1.12□□□□□ -2.23
SHU2P38957 FIG2YCR089W 4830 nt1.11□□□□□ -2.23
SHU2P38957 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
SHU2P38957 SIP4YJL089W 2490 nt1.1□□□□□ -2.23
SHU2P38957 YJL077W-AYJL077W-A 87 nt1.09□□□□□ -2.23
SHU2P38957 VAM6YDL077C 3150 nt1.07□□□□□ -2.24
SHU2P38957 YDR371C-AYDR371C-A 105 nt1.04□□□□□ -2.24
SHU2P38957 tV(UAC)BtV(UAC)B 74 nt1.03□□□□□ -2.24
SHU2P38957 tV(UAC)DtV(UAC)D 74 nt1.03□□□□□ -2.24
SHU2P38957 YML054C-AYML054C-A 159 nt1.02□□□□□ -2.25
SHU2P38957 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
SHU2P38957 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
SHU2P38957 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
SHU2P38957 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
SHU2P38957 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
SHU2P38957 tQ(UUG)QtQ(UUG)Q 76 nt0.99□□□□□ -2.25
SHU2P38957 BEM2YER155C 6504 nt0.99□□□□□ -2.25
SHU2P38957 PAU24YBR301W 363 nt0.98□□□□□ -2.25
SHU2P38957 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
SHU2P38957 PET111YMR257C 2403 nt0.97□□□□□ -2.25
SHU2P38957 YBR109W-AYBR109W-A 225 nt0.97□□□□□ -2.25
SHU2P38957 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
SHU2P38957 snR64snR64 101 nt0.95□□□□□ -2.26
SHU2P38957 YHR180C-BYHR180C-B 105 nt0.95□□□□□ -2.26
SHU2P38957 snR53snR53 91 nt0.93□□□□□ -2.26
SHU2P38957 YER090C-AYER090C-A 90 nt0.92□□□□□ -2.26
SHU2P38957 YKL225WYKL225W 348 nt0.92□□□□□ -2.26
SHU2P38957 YBL100W-BYBL100W-B 5313 nt0.92□□□□□ -2.26
SHU2P38957 IML1YJR138W 4755 nt0.91□□□□□ -2.26
SHU2P38957 snR38snR38 95 nt0.91□□□□□ -2.26
SHU2P38957 snR50snR50 90 nt0.91□□□□□ -2.26
SHU2P38957 RPL41AYDL184C 78 nt0.87□□□□□ -2.27
SHU2P38957 YBR296C-AYBR296C-A 120 nt0.85□□□□□ -2.27
SHU2P38957 AI1Q0050 2505 nt0.84□□□□□ -2.28
SHU2P38957 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
SHU2P38957 MLP1YKR095W 5628 nt0.72□□□□□ -2.29
SHU2P38957 snR67snR67 82 nt0.69□□□□□ -2.3
SHU2P38957 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
SHU2P38957 YDL159W-AYDL159W-A 132 nt0.67□□□□□ -2.3
SHU2P38957 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
SHU2P38957 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
SHU2P38957 IQG1YPL242C 4488 nt0.63□□□□□ -2.31
SHU2P38957 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
SHU2P38957 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
SHU2P38957 SKI7YOR076C 2244 nt0.6□□□□□ -2.31
SHU2P38957 YOR186C-AYOR186C-A 210 nt0.6□□□□□ -2.31
SHU2P38957 SOV1YMR066W 2697 nt0.58□□□□□ -2.32
SHU2P38957 ESP1YGR098C 4893 nt0.57□□□□□ -2.32
SHU2P38957 MLP2YIL149C 5040 nt0.54□□□□□ -2.32
SHU2P38957 YML100W-AYML100W-A 174 nt0.53□□□□□ -2.32
SHU2P38957 YLR149C-AYLR149C-A 87 nt0.52□□□□□ -2.33
SHU2P38957 YGR122C-AYGR122C-A 129 nt0.51□□□□□ -2.33
SHU2P38957 THO2YNL139C 4794 nt0.4□□□□□ -2.34
SHU2P38957 YKL106C-AYKL106C-A 120 nt0.36□□□□□ -2.35
SHU2P38957 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
SHU2P38957 UTP20YBL004W 7482 nt0.31□□□□□ -2.36
SHU2P38957 snR128snR128 126 nt0.3□□□□□ -2.36
SHU2P38957 YKL096C-BYKL096C-B 150 nt0.29□□□□□ -2.36
SHU2P38957 YKL145W-AYKL145W-A 93 nt0.29□□□□□ -2.36
SHU2P38957 YOR376W-AYOR376W-A 156 nt0.25□□□□□ -2.37
SHU2P38957 FMP27YLR454W 7887 nt0.23□□□□□ -2.37
SHU2P38957 tF(GAA)BtF(GAA)B 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)FtF(GAA)F 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)GtF(GAA)G 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)H1tF(GAA)H1 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)H2tF(GAA)H2 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)MtF(GAA)M 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)P1tF(GAA)P1 73 nt0.18□□□□□ -2.38
SHU2P38957 tF(GAA)P2tF(GAA)P2 73 nt0.18□□□□□ -2.38
SHU2P38957 tV(UAC)QtV(UAC)Q 76 nt0.18□□□□□ -2.38
SHU2P38957 YDL114W-AYDL114W-A 114 nt0.17□□□□□ -2.38
SHU2P38957 PAU9YBL108C-A 129 nt0.16□□□□□ -2.38
SHU2P38957 YOR316C-AYOR316C-A 210 nt0.11□□□□□ -2.39
SHU2P38957 tA(UGC)QtA(UGC)Q 76 nt0.06□□□□□ -2.4
SHU2P38957 YOL014WYOL014W 375 nt0.05□□□□□ -2.4
SHU2P38957 YER078W-AYER078W-A 165 nt0.03□□□□□ -2.4
SHU2P38957 snR77snR77 88 nt-0.01□□□□□ -2.41
SHU2P38957 SBH2YER019C-A 267 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms