Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeastyeast

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP3P38712 BEM3YPL115C 3387 nt0.68□□□□□ -2.3
RRP3P38712 YBR072C-AYBR072C-A 162 nt0.68□□□□□ -2.3
RRP3P38712 YCL001W-BYCL001W-B 255 nt0.67□□□□□ -2.3
RRP3P38712 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
RRP3P38712 YLL006W-AYLL006W-A 177 nt0.65□□□□□ -2.31
RRP3P38712 RPS26AYGL189C 360 nt0.64□□□□□ -2.31
RRP3P38712 GLG1YKR058W 1851 nt0.64□□□□□ -2.31
RRP3P38712 YDR371C-AYDR371C-A 105 nt0.63□□□□□ -2.31
RRP3P38712 tM(CAU)Q2tM(CAU)Q2 78 nt0.63□□□□□ -2.31
RRP3P38712 ORC3YLL004W 1851 nt0.61□□□□□ -2.31
RRP3P38712 YGR146C-AYGR146C-A 162 nt0.61□□□□□ -2.31
RRP3P38712 RCO1YMR075W 2055 nt0.61□□□□□ -2.31
RRP3P38712 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
RRP3P38712 ESP1YGR098C 4893 nt0.58□□□□□ -2.32
RRP3P38712 YBL100W-BYBL100W-B 5313 nt0.58□□□□□ -2.32
RRP3P38712 PET111YMR257C 2403 nt0.57□□□□□ -2.32
RRP3P38712 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
RRP3P38712 BIR1YJR089W 2865 nt0.54□□□□□ -2.32
RRP3P38712 YCR095W-AYCR095W-A 159 nt0.54□□□□□ -2.32
RRP3P38712 SOM1YEL059C-A 225 nt0.54□□□□□ -2.32
RRP3P38712 SBH1YER087C-B 249 nt0.51□□□□□ -2.33
RRP3P38712 YNL205CYNL205C 423 nt0.5□□□□□ -2.33
RRP3P38712 CSE1YGL238W 2883 nt0.49□□□□□ -2.33
RRP3P38712 AI1Q0050 2505 nt0.49□□□□□ -2.33
RRP3P38712 EST1YLR233C 2100 nt0.48□□□□□ -2.33
RRP3P38712 YBR099CYBR099C 384 nt0.47□□□□□ -2.33
RRP3P38712 PMP2YEL017C-A 132 nt0.46□□□□□ -2.34
RRP3P38712 FMP27YLR454W 7887 nt0.44□□□□□ -2.34
RRP3P38712 Q0143Q0143 153 nt0.44□□□□□ -2.34
RRP3P38712 YNL266WYNL266W 420 nt0.44□□□□□ -2.34
RRP3P38712 IQG1YPL242C 4488 nt0.44□□□□□ -2.34
RRP3P38712 snR69snR69 101 nt0.43□□□□□ -2.34
RRP3P38712 SEC10YLR166C 2616 nt0.43□□□□□ -2.34
RRP3P38712 YBR178WYBR178W 375 nt0.4□□□□□ -2.35
RRP3P38712 SOV1YMR066W 2697 nt0.39□□□□□ -2.35
RRP3P38712 YNL103W-AYNL103W-A 90 nt0.38□□□□□ -2.35
RRP3P38712 MLP1YKR095W 5628 nt0.35□□□□□ -2.35
RRP3P38712 tD(GUC)QtD(GUC)Q 75 nt0.35□□□□□ -2.35
RRP3P38712 YER078W-AYER078W-A 165 nt0.33□□□□□ -2.36
RRP3P38712 RDS3YPR094W 324 nt0.31□□□□□ -2.36
RRP3P38712 THO2YNL139C 4794 nt0.3□□□□□ -2.36
RRP3P38712 YJL077W-AYJL077W-A 87 nt0.3□□□□□ -2.36
RRP3P38712 YLR286W-AYLR286W-A 135 nt0.29□□□□□ -2.36
RRP3P38712 YBR196C-AYBR196C-A 150 nt0.29□□□□□ -2.36
RRP3P38712 snR85snR85 171 nt0.28□□□□□ -2.36
RRP3P38712 snR81snR81 201 nt0.26□□□□□ -2.37
RRP3P38712 snR61snR61 90 nt0.25□□□□□ -2.37
RRP3P38712 YOL013W-AYOL013W-A 192 nt0.24□□□□□ -2.37
RRP3P38712 YOR186C-AYOR186C-A 210 nt0.24□□□□□ -2.37
RRP3P38712 YDL159C-BYDL159C-B 177 nt0.23□□□□□ -2.37
RRP3P38712 YER090C-AYER090C-A 90 nt0.23□□□□□ -2.37
RRP3P38712 tQ(UUG)QtQ(UUG)Q 76 nt0.23□□□□□ -2.37
RRP3P38712 YBL071C-BYBL071C-B 99 nt0.23□□□□□ -2.37
RRP3P38712 snR50snR50 90 nt0.22□□□□□ -2.37
RRP3P38712 TFB5YDR079C-A 219 nt0.2□□□□□ -2.38
RRP3P38712 YGL041C-BYGL041C-B 183 nt0.19□□□□□ -2.38
RRP3P38712 YAL037C-AYAL037C-A 93 nt0.19□□□□□ -2.38
RRP3P38712 YLR299C-AYLR299C-A 93 nt0.18□□□□□ -2.38
RRP3P38712 YOL083C-AYOL083C-A 141 nt0.18□□□□□ -2.38
RRP3P38712 MLP2YIL149C 5040 nt0.18□□□□□ -2.38
RRP3P38712 YBL109WYBL109W 336 nt0.14□□□□□ -2.39
RRP3P38712 YML100W-AYML100W-A 174 nt0.12□□□□□ -2.39
RRP3P38712 YOL164W-AYOL164W-A 183 nt0.09□□□□□ -2.4
RRP3P38712 YML054C-AYML054C-A 159 nt0.07□□□□□ -2.4
RRP3P38712 YMR326CYMR326C 309 nt0.05□□□□□ -2.4
RRP3P38712 snR45snR45 172 nt0.05□□□□□ -2.4
RRP3P38712 tS(GCU)Q1tS(GCU)Q1 86 nt0.04□□□□□ -2.4
RRP3P38712 snR128snR128 126 nt0.04□□□□□ -2.4
RRP3P38712 YHR217CYHR217C 462 nt0.03□□□□□ -2.4
RRP3P38712 snR67snR67 82 nt-0.02□□□□□ -2.41
RRP3P38712 SKI7YOR076C 2244 nt-0.03□□□□□ -2.41
RRP3P38712 YBR109W-AYBR109W-A 225 nt-0.03□□□□□ -2.41
RRP3P38712 YDR524C-AYDR524C-A 120 nt-0.04□□□□□ -2.42
RRP3P38712 YGR240C-AYGR240C-A 201 nt-0.04□□□□□ -2.42
RRP3P38712 YHR180C-BYHR180C-B 105 nt-0.05□□□□□ -2.42
RRP3P38712 snR38snR38 95 nt-0.05□□□□□ -2.42
RRP3P38712 snR47snR47 99 nt-0.05□□□□□ -2.42
RRP3P38712 snR62snR62 100 nt-0.09□□□□□ -2.42
RRP3P38712 YBL100W-CYBL100W-C 120 nt-0.15□□□□□ -2.43
RRP3P38712 YDR034C-AYDR034C-A 177 nt-0.17□□□□□ -2.44
RRP3P38712 YBR296C-AYBR296C-A 120 nt-0.17□□□□□ -2.44
RRP3P38712 YJL113WYJL113W 4647 nt-0.17□□□□□ -2.44
RRP3P38712 RPL41AYDL184C 78 nt-0.18□□□□□ -2.44
RRP3P38712 tA(UGC)QtA(UGC)Q 76 nt-0.18□□□□□ -2.44
RRP3P38712 PAU9YBL108C-A 129 nt-0.23□□□□□ -2.45
RRP3P38712 YKL225WYKL225W 348 nt-0.25□□□□□ -2.45
RRP3P38712 YLL066W-BYLL066W-B 171 nt-0.25□□□□□ -2.45
RRP3P38712 SBH2YER019C-A 267 nt-0.26□□□□□ -2.45
RRP3P38712 YOR376W-AYOR376W-A 156 nt-0.33□□□□□ -2.46
RRP3P38712 YDL247W-AYDL247W-A 75 nt-0.34□□□□□ -2.46
RRP3P38712 snR64snR64 101 nt-0.41□□□□□ -2.48
RRP3P38712 YKL106C-AYKL106C-A 120 nt-0.42□□□□□ -2.48
RRP3P38712 YDL159W-AYDL159W-A 132 nt-0.46□□□□□ -2.48
RRP3P38712 snR161snR161 161 nt-0.5□□□□□ -2.49
RRP3P38712 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
RRP3P38712 YOR316C-AYOR316C-A 210 nt-0.51□□□□□ -2.49
RRP3P38712 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
RRP3P38712 snR53snR53 91 nt-0.59□□□□□ -2.5
RRP3P38712 YGR122C-AYGR122C-A 129 nt-0.63□□□□□ -2.51
RRP3P38712 snR77snR77 88 nt-0.64□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms