Protein–RNA interactions for Protein: P38360

PCA1, P-type cation-transporting ATPase, yeastyeast

Predictions only

Length 1,216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCA1P38360 tN(GUU)QtN(GUU)Q 71 nt0.89□□□□□ -2.27
PCA1P38360 YBR072C-AYBR072C-A 162 nt0.89□□□□□ -2.27
PCA1P38360 snR45snR45 172 nt0.89□□□□□ -2.27
PCA1P38360 BEM3YPL115C 3387 nt0.88□□□□□ -2.27
PCA1P38360 YKL145W-AYKL145W-A 93 nt0.88□□□□□ -2.27
PCA1P38360 YLR399W-AYLR399W-A 105 nt0.88□□□□□ -2.27
PCA1P38360 YOL083C-AYOL083C-A 141 nt0.88□□□□□ -2.27
PCA1P38360 YPR160W-AYPR160W-A 81 nt0.87□□□□□ -2.27
PCA1P38360 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
PCA1P38360 YGR146C-AYGR146C-A 162 nt0.86□□□□□ -2.27
PCA1P38360 YAL037C-AYAL037C-A 93 nt0.85□□□□□ -2.27
PCA1P38360 YBL071C-BYBL071C-B 99 nt0.83□□□□□ -2.28
PCA1P38360 NNF2YGR089W 2811 nt0.81□□□□□ -2.28
PCA1P38360 YBR196C-AYBR196C-A 150 nt0.8□□□□□ -2.28
PCA1P38360 YSP1YHR155W 3687 nt0.79□□□□□ -2.28
PCA1P38360 THO2YNL139C 4794 nt0.79□□□□□ -2.28
PCA1P38360 snR62snR62 100 nt0.78□□□□□ -2.28
PCA1P38360 SEC10YLR166C 2616 nt0.77□□□□□ -2.29
PCA1P38360 RPS26AYGL189C 360 nt0.76□□□□□ -2.29
PCA1P38360 YLR286W-AYLR286W-A 135 nt0.75□□□□□ -2.29
PCA1P38360 GLG1YKR058W 1851 nt0.73□□□□□ -2.29
PCA1P38360 YDR034C-AYDR034C-A 177 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
PCA1P38360 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
PCA1P38360 YOL164W-AYOL164W-A 183 nt0.73□□□□□ -2.29
PCA1P38360 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
PCA1P38360 AI1Q0050 2505 nt0.72□□□□□ -2.29
PCA1P38360 EST1YLR233C 2100 nt0.71□□□□□ -2.3
PCA1P38360 CSE1YGL238W 2883 nt0.71□□□□□ -2.3
PCA1P38360 BUL2YML111W 2763 nt0.71□□□□□ -2.3
PCA1P38360 snR69snR69 101 nt0.7□□□□□ -2.3
PCA1P38360 tD(GUC)QtD(GUC)Q 75 nt0.7□□□□□ -2.3
PCA1P38360 YGR240C-AYGR240C-A 201 nt0.7□□□□□ -2.3
PCA1P38360 YLL006W-AYLL006W-A 177 nt0.7□□□□□ -2.3
PCA1P38360 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
PCA1P38360 snR47snR47 99 nt0.7□□□□□ -2.3
PCA1P38360 YOR192C-BYOR192C-B 5313 nt0.7□□□□□ -2.3
PCA1P38360 YBL100W-CYBL100W-C 120 nt0.69□□□□□ -2.3
PCA1P38360 ULP2YIL031W 3105 nt0.69□□□□□ -2.3
PCA1P38360 RPM2YML091C 3609 nt0.69□□□□□ -2.3
PCA1P38360 ORC3YLL004W 1851 nt0.68□□□□□ -2.3
PCA1P38360 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
PCA1P38360 YLR299C-AYLR299C-A 93 nt0.65□□□□□ -2.31
PCA1P38360 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
PCA1P38360 YDL159C-BYDL159C-B 177 nt0.64□□□□□ -2.31
PCA1P38360 YNL054W-BYNL054W-B 5250 nt0.63□□□□□ -2.31
PCA1P38360 RDS3YPR094W 324 nt0.63□□□□□ -2.31
PCA1P38360 IQG1YPL242C 4488 nt0.63□□□□□ -2.31
PCA1P38360 PET111YMR257C 2403 nt0.62□□□□□ -2.31
PCA1P38360 YML054C-AYML054C-A 159 nt0.6□□□□□ -2.31
PCA1P38360 tQ(UUG)QtQ(UUG)Q 76 nt0.59□□□□□ -2.31
PCA1P38360 YDR371C-AYDR371C-A 105 nt0.56□□□□□ -2.32
PCA1P38360 YPL060C-AYPL060C-A 3315 nt0.56□□□□□ -2.32
PCA1P38360 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
PCA1P38360 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
PCA1P38360 YER078W-AYER078W-A 165 nt0.55□□□□□ -2.32
PCA1P38360 YHR180C-BYHR180C-B 105 nt0.55□□□□□ -2.32
PCA1P38360 YJL077W-AYJL077W-A 87 nt0.55□□□□□ -2.32
PCA1P38360 snR50snR50 90 nt0.55□□□□□ -2.32
PCA1P38360 MLP1YKR095W 5628 nt0.55□□□□□ -2.32
PCA1P38360 snR64snR64 101 nt0.53□□□□□ -2.32
PCA1P38360 YBR109W-AYBR109W-A 225 nt0.53□□□□□ -2.32
PCA1P38360 YKL225WYKL225W 348 nt0.52□□□□□ -2.33
PCA1P38360 RPL41AYDL184C 78 nt0.5□□□□□ -2.33
PCA1P38360 snR38snR38 95 nt0.5□□□□□ -2.33
PCA1P38360 MLP2YIL149C 5040 nt0.49□□□□□ -2.33
PCA1P38360 snR53snR53 91 nt0.48□□□□□ -2.33
PCA1P38360 YER090C-AYER090C-A 90 nt0.47□□□□□ -2.33
PCA1P38360 YBR296C-AYBR296C-A 120 nt0.47□□□□□ -2.33
PCA1P38360 YDL159W-AYDL159W-A 132 nt0.42□□□□□ -2.34
PCA1P38360 YBL100W-BYBL100W-B 5313 nt0.42□□□□□ -2.34
PCA1P38360 ESP1YGR098C 4893 nt0.41□□□□□ -2.34
PCA1P38360 snR67snR67 82 nt0.39□□□□□ -2.35
PCA1P38360 YOR186C-AYOR186C-A 210 nt0.37□□□□□ -2.35
PCA1P38360 SKI7YOR076C 2244 nt0.37□□□□□ -2.35
PCA1P38360 YGR122C-AYGR122C-A 129 nt0.33□□□□□ -2.36
PCA1P38360 YLR149C-AYLR149C-A 87 nt0.28□□□□□ -2.36
PCA1P38360 SOV1YMR066W 2697 nt0.26□□□□□ -2.37
PCA1P38360 YML100W-AYML100W-A 174 nt0.25□□□□□ -2.37
PCA1P38360 YKL106C-AYKL106C-A 120 nt0.23□□□□□ -2.37
PCA1P38360 YOL013W-AYOL013W-A 192 nt0.23□□□□□ -2.37
PCA1P38360 snR128snR128 126 nt0.19□□□□□ -2.38
PCA1P38360 PAU9YBL108C-A 129 nt0.17□□□□□ -2.38
PCA1P38360 YKL096C-BYKL096C-B 150 nt0.15□□□□□ -2.39
PCA1P38360 YOR376W-AYOR376W-A 156 nt0.15□□□□□ -2.39
PCA1P38360 YDL114W-AYDL114W-A 114 nt0.13□□□□□ -2.39
PCA1P38360 tV(UAC)QtV(UAC)Q 76 nt0.07□□□□□ -2.4
PCA1P38360 snR75snR75 89 nt0.03□□□□□ -2.4
PCA1P38360 YOR316C-AYOR316C-A 210 nt0.03□□□□□ -2.4
PCA1P38360 tA(UGC)QtA(UGC)Q 76 nt0.02□□□□□ -2.41
PCA1P38360 snR77snR77 88 nt0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms