Protein–RNA interactions for Protein: P38086

RDH54, DNA repair and recombination protein RDH54, yeastyeast

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RDH54P38086 YBL071C-BYBL071C-B 99 nt1.31□□□□□ -2.2
RDH54P38086 YOL014WYOL014W 375 nt1.3□□□□□ -2.2
RDH54P38086 YBL100W-CYBL100W-C 120 nt1.3□□□□□ -2.2
RDH54P38086 YLL006W-AYLL006W-A 177 nt1.29□□□□□ -2.2
RDH54P38086 SIP4YJL089W 2490 nt1.28□□□□□ -2.2
RDH54P38086 YLR286W-AYLR286W-A 135 nt1.26□□□□□ -2.21
RDH54P38086 MYO1YHR023W 5787 nt1.25□□□□□ -2.21
RDH54P38086 RPS26AYGL189C 360 nt1.25□□□□□ -2.21
RDH54P38086 NST1YNL091W 3723 nt1.24□□□□□ -2.21
RDH54P38086 tD(GUC)QtD(GUC)Q 75 nt1.24□□□□□ -2.21
RDH54P38086 UTP20YBL004W 7482 nt1.22□□□□□ -2.21
RDH54P38086 BUD3YCL014W 4911 nt1.22□□□□□ -2.21
RDH54P38086 EST1YLR233C 2100 nt1.21□□□□□ -2.22
RDH54P38086 YOL164W-AYOL164W-A 183 nt1.21□□□□□ -2.22
RDH54P38086 snR69snR69 101 nt1.2□□□□□ -2.22
RDH54P38086 YDR034C-AYDR034C-A 177 nt1.18□□□□□ -2.22
RDH54P38086 YGR240C-AYGR240C-A 201 nt1.18□□□□□ -2.22
RDH54P38086 NIP1YMR309C 2439 nt1.17□□□□□ -2.22
RDH54P38086 RKR1YMR247C 4689 nt1.15□□□□□ -2.22
RDH54P38086 YLR299C-AYLR299C-A 93 nt1.15□□□□□ -2.23
RDH54P38086 YJR029WYJR029W 5268 nt1.15□□□□□ -2.23
RDH54P38086 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.23
RDH54P38086 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
RDH54P38086 YDL159C-BYDL159C-B 177 nt1.14□□□□□ -2.23
RDH54P38086 RDS3YPR094W 324 nt1.14□□□□□ -2.23
RDH54P38086 YJL077W-AYJL077W-A 87 nt1.12□□□□□ -2.23
RDH54P38086 snR47snR47 99 nt1.12□□□□□ -2.23
RDH54P38086 BUL2YML111W 2763 nt1.11□□□□□ -2.23
RDH54P38086 BEM2YER155C 6504 nt1.1□□□□□ -2.23
RDH54P38086 YPR117WYPR117W 7470 nt1.09□□□□□ -2.23
RDH54P38086 YKL145W-AYKL145W-A 93 nt1.09□□□□□ -2.23
RDH54P38086 YOR192C-BYOR192C-B 5313 nt1.09□□□□□ -2.24
RDH54P38086 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
RDH54P38086 tQ(UUG)QtQ(UUG)Q 76 nt1.06□□□□□ -2.24
RDH54P38086 PET111YMR257C 2403 nt1.03□□□□□ -2.24
RDH54P38086 YMR160WYMR160W 2451 nt1.02□□□□□ -2.25
RDH54P38086 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
RDH54P38086 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
RDH54P38086 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
RDH54P38086 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
RDH54P38086 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
RDH54P38086 YDR371C-AYDR371C-A 105 nt0.97□□□□□ -2.25
RDH54P38086 YHR180C-BYHR180C-B 105 nt0.97□□□□□ -2.25
RDH54P38086 ORC3YLL004W 1851 nt0.97□□□□□ -2.25
RDH54P38086 YML054C-AYML054C-A 159 nt0.95□□□□□ -2.26
RDH54P38086 LTE1YAL024C 4308 nt0.94□□□□□ -2.26
RDH54P38086 YPL060C-AYPL060C-A 3315 nt0.94□□□□□ -2.26
RDH54P38086 YNL054W-BYNL054W-B 5250 nt0.87□□□□□ -2.27
RDH54P38086 RPL41AYDL184C 78 nt0.87□□□□□ -2.27
RDH54P38086 AI1Q0050 2505 nt0.86□□□□□ -2.27
RDH54P38086 snR50snR50 90 nt0.85□□□□□ -2.27
RDH54P38086 MLP1YKR095W 5628 nt0.84□□□□□ -2.27
RDH54P38086 YER090C-AYER090C-A 90 nt0.84□□□□□ -2.27
RDH54P38086 snR64snR64 101 nt0.82□□□□□ -2.28
RDH54P38086 YKL225WYKL225W 348 nt0.81□□□□□ -2.28
RDH54P38086 YBR109W-AYBR109W-A 225 nt0.81□□□□□ -2.28
RDH54P38086 YBR296C-AYBR296C-A 120 nt0.8□□□□□ -2.28
RDH54P38086 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
RDH54P38086 snR53snR53 91 nt0.75□□□□□ -2.29
RDH54P38086 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
RDH54P38086 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
RDH54P38086 YBL100W-BYBL100W-B 5313 nt0.72□□□□□ -2.29
RDH54P38086 snR67snR67 82 nt0.71□□□□□ -2.3
RDH54P38086 YOR186C-AYOR186C-A 210 nt0.71□□□□□ -2.3
RDH54P38086 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
RDH54P38086 snR38snR38 95 nt0.67□□□□□ -2.3
RDH54P38086 YER078W-AYER078W-A 165 nt0.65□□□□□ -2.31
RDH54P38086 THO2YNL139C 4794 nt0.63□□□□□ -2.31
RDH54P38086 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
RDH54P38086 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
RDH54P38086 IQG1YPL242C 4488 nt0.59□□□□□ -2.32
RDH54P38086 SKI7YOR076C 2244 nt0.58□□□□□ -2.32
RDH54P38086 MLP2YIL149C 5040 nt0.52□□□□□ -2.33
RDH54P38086 YDL159W-AYDL159W-A 132 nt0.47□□□□□ -2.33
RDH54P38086 YGR122C-AYGR122C-A 129 nt0.44□□□□□ -2.34
RDH54P38086 YML100W-AYML100W-A 174 nt0.42□□□□□ -2.34
RDH54P38086 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
RDH54P38086 snR128snR128 126 nt0.38□□□□□ -2.35
RDH54P38086 YKL106C-AYKL106C-A 120 nt0.36□□□□□ -2.35
RDH54P38086 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
RDH54P38086 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
RDH54P38086 YLR149C-AYLR149C-A 87 nt0.29□□□□□ -2.36
RDH54P38086 PAU9YBL108C-A 129 nt0.28□□□□□ -2.36
RDH54P38086 YKL096C-BYKL096C-B 150 nt0.16□□□□□ -2.38
RDH54P38086 YDL114W-AYDL114W-A 114 nt0.12□□□□□ -2.39
RDH54P38086 YOR376W-AYOR376W-A 156 nt0.12□□□□□ -2.39
RDH54P38086 YOR316C-AYOR316C-A 210 nt0.02□□□□□ -2.41
RDH54P38086 tA(UGC)QtA(UGC)Q 76 nt0□□□□□ -2.41
RDH54P38086 SBH2YER019C-A 267 nt-0.02□□□□□ -2.41
RDH54P38086 tV(UAC)QtV(UAC)Q 76 nt-0.04□□□□□ -2.42
RDH54P38086 snR77snR77 88 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 38.6 ms