Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 tD(GUC)QtD(GUC)Q 75 nt1.2□□□□□ -2.22
SPC42P36094 HUG1YML058W-A 207 nt1.2□□□□□ -2.22
SPC42P36094 YPL060C-AYPL060C-A 3315 nt1.19□□□□□ -2.22
SPC42P36094 snR53snR53 91 nt1.18□□□□□ -2.22
SPC42P36094 EST1YLR233C 2100 nt1.18□□□□□ -2.22
SPC42P36094 MYO1YHR023W 5787 nt1.16□□□□□ -2.22
SPC42P36094 snR69snR69 101 nt1.15□□□□□ -2.23
SPC42P36094 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
SPC42P36094 snR64snR64 101 nt1.14□□□□□ -2.23
SPC42P36094 YLR299C-AYLR299C-A 93 nt1.14□□□□□ -2.23
SPC42P36094 CSE1YGL238W 2883 nt1.14□□□□□ -2.23
SPC42P36094 RKR1YMR247C 4689 nt1.13□□□□□ -2.23
SPC42P36094 EMT1tM(CAU)D 73 nt1.13□□□□□ -2.23
SPC42P36094 EMT5tM(CAU)J1 73 nt1.13□□□□□ -2.23
SPC42P36094 EMT3tM(CAU)J2 73 nt1.13□□□□□ -2.23
SPC42P36094 EMT4tM(CAU)M 73 nt1.13□□□□□ -2.23
SPC42P36094 EMT2tM(CAU)O2 73 nt1.13□□□□□ -2.23
SPC42P36094 YDL159C-BYDL159C-B 177 nt1.11□□□□□ -2.23
SPC42P36094 IML1YJR138W 4755 nt1.1□□□□□ -2.23
SPC42P36094 RDS3YPR094W 324 nt1.08□□□□□ -2.24
SPC42P36094 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
SPC42P36094 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
SPC42P36094 YLL006W-AYLL006W-A 177 nt1.07□□□□□ -2.24
SPC42P36094 SIP4YJL089W 2490 nt1.07□□□□□ -2.24
SPC42P36094 NIP1YMR309C 2439 nt1.05□□□□□ -2.24
SPC42P36094 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SPC42P36094 YKL225WYKL225W 348 nt1.05□□□□□ -2.24
SPC42P36094 YML054C-AYML054C-A 159 nt1.03□□□□□ -2.24
SPC42P36094 BUL2YML111W 2763 nt1.02□□□□□ -2.25
SPC42P36094 YBR109W-AYBR109W-A 225 nt1.02□□□□□ -2.25
SPC42P36094 PAU12YGR294W 363 nt1.01□□□□□ -2.25
SPC42P36094 YJL077W-AYJL077W-A 87 nt1.01□□□□□ -2.25
SPC42P36094 snR50snR50 90 nt1.01□□□□□ -2.25
SPC42P36094 YHR180C-BYHR180C-B 105 nt1□□□□□ -2.25
SPC42P36094 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
SPC42P36094 YNL054W-BYNL054W-B 5250 nt0.97□□□□□ -2.25
SPC42P36094 RPL41AYDL184C 78 nt0.96□□□□□ -2.26
SPC42P36094 YDR371C-AYDR371C-A 105 nt0.96□□□□□ -2.26
SPC42P36094 snR38snR38 95 nt0.96□□□□□ -2.26
SPC42P36094 YPR159C-AYPR159C-A 102 nt0.95□□□□□ -2.26
SPC42P36094 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
SPC42P36094 YBR296C-AYBR296C-A 120 nt0.94□□□□□ -2.26
SPC42P36094 tQ(UUG)QtQ(UUG)Q 76 nt0.93□□□□□ -2.26
SPC42P36094 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
SPC42P36094 AI1Q0050 2505 nt0.92□□□□□ -2.26
SPC42P36094 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
SPC42P36094 YDL159W-AYDL159W-A 132 nt0.87□□□□□ -2.27
SPC42P36094 PAU24YBR301W 363 nt0.87□□□□□ -2.27
SPC42P36094 PET111YMR257C 2403 nt0.87□□□□□ -2.27
SPC42P36094 YER090C-AYER090C-A 90 nt0.86□□□□□ -2.27
SPC42P36094 YLR149C-AYLR149C-A 87 nt0.84□□□□□ -2.27
SPC42P36094 SKI7YOR076C 2244 nt0.83□□□□□ -2.28
SPC42P36094 tF(GAA)BtF(GAA)B 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)FtF(GAA)F 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)GtF(GAA)G 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)H1tF(GAA)H1 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)H2tF(GAA)H2 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)MtF(GAA)M 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)P1tF(GAA)P1 73 nt0.81□□□□□ -2.28
SPC42P36094 tF(GAA)P2tF(GAA)P2 73 nt0.81□□□□□ -2.28
SPC42P36094 YGR122C-AYGR122C-A 129 nt0.77□□□□□ -2.29
SPC42P36094 YKL096C-BYKL096C-B 150 nt0.76□□□□□ -2.29
SPC42P36094 MLP2YIL149C 5040 nt0.76□□□□□ -2.29
SPC42P36094 YBL100W-BYBL100W-B 5313 nt0.74□□□□□ -2.29
SPC42P36094 snR67snR67 82 nt0.72□□□□□ -2.29
SPC42P36094 YMR160WYMR160W 2451 nt0.69□□□□□ -2.3
SPC42P36094 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
SPC42P36094 YOL014WYOL014W 375 nt0.68□□□□□ -2.3
SPC42P36094 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
SPC42P36094 YKL145W-AYKL145W-A 93 nt0.67□□□□□ -2.3
SPC42P36094 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)HtT(AGU)H 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)I1tT(AGU)I1 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)I2tT(AGU)I2 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)JtT(AGU)J 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)N1tT(AGU)N1 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)N2tT(AGU)N2 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)O1tT(AGU)O1 73 nt0.66□□□□□ -2.3
SPC42P36094 tT(AGU)O2tT(AGU)O2 73 nt0.66□□□□□ -2.3
SPC42P36094 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
SPC42P36094 snR75snR75 89 nt0.59□□□□□ -2.31
SPC42P36094 YER078W-AYER078W-A 165 nt0.59□□□□□ -2.31
SPC42P36094 YOR186C-AYOR186C-A 210 nt0.54□□□□□ -2.32
SPC42P36094 YKL106C-AYKL106C-A 120 nt0.53□□□□□ -2.32
SPC42P36094 YML100W-AYML100W-A 174 nt0.5□□□□□ -2.33
SPC42P36094 FMP27YLR454W 7887 nt0.46□□□□□ -2.34
SPC42P36094 YDL114W-AYDL114W-A 114 nt0.46□□□□□ -2.34
SPC42P36094 SOV1YMR066W 2697 nt0.45□□□□□ -2.34
SPC42P36094 tV(UAC)QtV(UAC)Q 76 nt0.42□□□□□ -2.34
SPC42P36094 YOR376W-AYOR376W-A 156 nt0.38□□□□□ -2.35
SPC42P36094 THO2YNL139C 4794 nt0.38□□□□□ -2.35
SPC42P36094 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
SPC42P36094 snR128snR128 126 nt0.3□□□□□ -2.36
SPC42P36094 YOR316C-AYOR316C-A 210 nt0.3□□□□□ -2.36
SPC42P36094 snR77snR77 88 nt0.25□□□□□ -2.37
SPC42P36094 PAU9YBL108C-A 129 nt0.25□□□□□ -2.37
SPC42P36094 SBH2YER019C-A 267 nt0.23□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms