Protein–RNA interactions for Protein: P35207

SKI2, Antiviral helicase SKI2, yeastyeast

Known RBP RIP-Chip data

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI2P35207 YGL188C-AYGL188C-A 141 nt-0.14□□□□□ -2.43
SKI2P35207 Q0142Q0142 177 nt-0.14□□□□□ -2.43
SKI2P35207 YPL060C-AYPL060C-A 3315 nt-0.17□□□□□ -2.44
SKI2P35207 snR39BsnR39B 96 nt-0.18□□□□□ -2.44
SKI2P35207 snR52snR52 92 nt-0.18□□□□□ -2.44
SKI2P35207 URB1YKL014C 5295 nt-0.2□□□□□ -2.44
SKI2P35207 YOR329W-AYOR329W-A 210 nt-0.2□□□□□ -2.44
SKI2P35207 tM(CAU)Q2tM(CAU)Q2 78 nt-0.23□□□□□ -2.45
SKI2P35207 YOR170WYOR170W 306 nt-0.24□□□□□ -2.45
SKI2P35207 snR161snR161 161 nt-0.24□□□□□ -2.45
SKI2P35207 SEC10YLR166C 2616 nt-0.24□□□□□ -2.45
SKI2P35207 tQ(UUG)QtQ(UUG)Q 76 nt-0.27□□□□□ -2.45
SKI2P35207 snR69snR69 101 nt-0.28□□□□□ -2.45
SKI2P35207 SBH2YER019C-A 267 nt-0.28□□□□□ -2.45
SKI2P35207 YBR223W-AYBR223W-A 120 nt-0.28□□□□□ -2.45
SKI2P35207 tL(UAA)QtL(UAA)Q 85 nt-0.29□□□□□ -2.46
SKI2P35207 YNL067W-BYNL067W-B 141 nt-0.3□□□□□ -2.46
SKI2P35207 tT(UGU)G1tT(UGU)G1 72 nt-0.31□□□□□ -2.46
SKI2P35207 tT(UGU)G2tT(UGU)G2 72 nt-0.31□□□□□ -2.46
SKI2P35207 tT(UGU)PtT(UGU)P 72 nt-0.31□□□□□ -2.46
SKI2P35207 snR50snR50 90 nt-0.32□□□□□ -2.46
SKI2P35207 YML100W-AYML100W-A 174 nt-0.33□□□□□ -2.46
SKI2P35207 JLP2YMR132C 627 nt-0.33□□□□□ -2.46
SKI2P35207 PMP2YEL017C-A 132 nt-0.34□□□□□ -2.46
SKI2P35207 YLR342W-AYLR342W-A 174 nt-0.34□□□□□ -2.46
SKI2P35207 YDL007C-AYDL007C-A 258 nt-0.35□□□□□ -2.47
SKI2P35207 YGR146C-AYGR146C-A 162 nt-0.35□□□□□ -2.47
SKI2P35207 YBL053WYBL053W 375 nt-0.35□□□□□ -2.47
SKI2P35207 YIL071W-AYIL071W-A 477 nt-0.36□□□□□ -2.47
SKI2P35207 YJL077W-AYJL077W-A 87 nt-0.36□□□□□ -2.47
SKI2P35207 RPM2YML091C 3609 nt-0.37□□□□□ -2.47
SKI2P35207 YHL009W-BYHL009W-B 5409 nt-0.37□□□□□ -2.47
SKI2P35207 YNL266WYNL266W 420 nt-0.37□□□□□ -2.47
SKI2P35207 PAU9YBL108C-A 129 nt-0.37□□□□□ -2.47
SKI2P35207 snR48snR48 113 nt-0.37□□□□□ -2.47
SKI2P35207 YJL150WYJL150W 303 nt-0.38□□□□□ -2.47
SKI2P35207 RDS3YPR094W 324 nt-0.39□□□□□ -2.47
SKI2P35207 YBR178WYBR178W 375 nt-0.39□□□□□ -2.47
SKI2P35207 YDR406W-AYDR406W-A 246 nt-0.4□□□□□ -2.47
SKI2P35207 YNL198CYNL198C 303 nt-0.4□□□□□ -2.47
SKI2P35207 YER090C-AYER090C-A 90 nt-0.41□□□□□ -2.48
SKI2P35207 YHL015W-AYHL015W-A 84 nt-0.41□□□□□ -2.48
SKI2P35207 tA(UGC)QtA(UGC)Q 76 nt-0.42□□□□□ -2.48
SKI2P35207 YOR102WYOR102W 351 nt-0.42□□□□□ -2.48
SKI2P35207 tD(GUC)QtD(GUC)Q 75 nt-0.44□□□□□ -2.48
SKI2P35207 YLR286W-AYLR286W-A 135 nt-0.48□□□□□ -2.49
SKI2P35207 YNL205CYNL205C 423 nt-0.48□□□□□ -2.49
SKI2P35207 SPG3YDR504C 384 nt-0.49□□□□□ -2.49
SKI2P35207 YDL159C-BYDL159C-B 177 nt-0.52□□□□□ -2.49
SKI2P35207 snR33snR33 183 nt-0.55□□□□□ -2.5
SKI2P35207 SKI7YOR076C 2244 nt-0.56□□□□□ -2.5 RIP-Chip
SKI2P35207 snR67snR67 82 nt-0.57□□□□□ -2.5
SKI2P35207 YMR046W-AYMR046W-A 129 nt-0.6□□□□□ -2.51
SKI2P35207 YBR196C-AYBR196C-A 150 nt-0.61□□□□□ -2.51
SKI2P35207 YLR299C-AYLR299C-A 93 nt-0.62□□□□□ -2.51
SKI2P35207 SOM1YEL059C-A 225 nt-0.65□□□□□ -2.51
SKI2P35207 YDR543CYDR543C 300 nt-0.68□□□□□ -2.52
SKI2P35207 YLR466C-BYLR466C-B 117 nt-0.68□□□□□ -2.52
SKI2P35207 YML054C-AYML054C-A 159 nt-0.68□□□□□ -2.52
SKI2P35207 YNL338WYNL338W 159 nt-0.7□□□□□ -2.52
SKI2P35207 YGR151CYGR151C 336 nt-0.72□□□□□ -2.52
SKI2P35207 tM(CAU)Q1tM(CAU)Q1 76 nt-0.74□□□□□ -2.53
SKI2P35207 YCR095W-AYCR095W-A 159 nt-0.78□□□□□ -2.53
SKI2P35207 YCL001W-BYCL001W-B 255 nt-0.79□□□□□ -2.54
SKI2P35207 YHR180C-BYHR180C-B 105 nt-0.8□□□□□ -2.54
SKI2P35207 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
SKI2P35207 YOL083C-AYOL083C-A 141 nt-0.85□□□□□ -2.55
SKI2P35207 YOR376W-AYOR376W-A 156 nt-0.87□□□□□ -2.55
SKI2P35207 YBL071C-BYBL071C-B 99 nt-0.89□□□□□ -2.55
SKI2P35207 snR77snR77 88 nt-0.92□□□□□ -2.56
SKI2P35207 YBR109W-AYBR109W-A 225 nt-0.93□□□□□ -2.56
SKI2P35207 snR38snR38 95 nt-0.97□□□□□ -2.56
SKI2P35207 YOL164W-AYOL164W-A 183 nt-0.98□□□□□ -2.57
SKI2P35207 CDC65tQ(CUG)M 72 nt-0.99□□□□□ -2.57
SKI2P35207 YNL337WYNL337W 255 nt-0.99□□□□□ -2.57
SKI2P35207 RPL41AYDL184C 78 nt-1□□□□□ -2.57
SKI2P35207 snR81snR81 201 nt-1.01□□□□□ -2.57
SKI2P35207 YKL106C-AYKL106C-A 120 nt-1.02□□□□□ -2.57
SKI2P35207 snR47snR47 99 nt-1.02□□□□□ -2.57
SKI2P35207 YBR296C-AYBR296C-A 120 nt-1.02□□□□□ -2.57
SKI2P35207 tY(GUA)QtY(GUA)Q 84 nt-1.04□□□□□ -2.58
SKI2P35207 YGL007C-AYGL007C-A 87 nt-1.05□□□□□ -2.58
SKI2P35207 YAL037C-AYAL037C-A 93 nt-1.05□□□□□ -2.58
SKI2P35207 YGR240C-AYGR240C-A 201 nt-1.06□□□□□ -2.58
SKI2P35207 Q0032Q0032 291 nt-1.1□□□□□ -2.59
SKI2P35207 YMR315W-AYMR315W-A 108 nt-1.1□□□□□ -2.59
SKI2P35207 YOR316C-AYOR316C-A 210 nt-1.1□□□□□ -2.59
SKI2P35207 YBR126W-BYBR126W-B 144 nt-1.1□□□□□ -2.59
SKI2P35207 tS(GCU)Q1tS(GCU)Q1 86 nt-1.12□□□□□ -2.59
SKI2P35207 YNL103W-AYNL103W-A 90 nt-1.16□□□□□ -2.6
SKI2P35207 YGL041C-BYGL041C-B 183 nt-1.2□□□□□ -2.6
SKI2P35207 YLR294CYLR294C 330 nt-1.2□□□□□ -2.6
SKI2P35207 YBL100W-CYBL100W-C 120 nt-1.2□□□□□ -2.6
SKI2P35207 YOR225WYOR225W 330 nt-1.21□□□□□ -2.6
SKI2P35207 YKL225WYKL225W 348 nt-1.26□□□□□ -2.61
SKI2P35207 YNL170WYNL170W 396 nt-1.26□□□□□ -2.61
SKI2P35207 snR61snR61 90 nt-1.31□□□□□ -2.62
SKI2P35207 YOR309CYOR309C 381 nt-1.32□□□□□ -2.62
SKI2P35207 YDR034C-AYDR034C-A 177 nt-1.34□□□□□ -2.62
SKI2P35207 YJR162CYJR162C 351 nt-1.4□□□□□ -2.63
Retrieved 100 of 7,029 protein–RNA pairs in 525.9 ms